Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0342 |
Symbol | rpsM |
ID | 4688612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 340050 |
End bp | 340415 |
Gene Length | 366 bp |
Protein Length | 121 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639833334 |
Product | 30S ribosomal protein S13 |
Protein accession | YP_980586 |
Protein GI | 121603257 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0099] Ribosomal protein S13 |
TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.158727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00039866 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCACGTA TCGCTGGTAT CAACATTCCG CCGCAGAAGC ACGCCGAAAT CGGCTTGACT GCAATTTTTG GCATTGGTCG CACACGCGCT CGCAAAATTT GCGAAGCCTG TGAAATCGAC TATGCCAAGA AAATCAAAGA TCTGACCGAC AGTGACCTGG AAAAAATCCG GGACCACATC GCTCAGTTCA CCATCGAAGG CGATTTGCGT CGTGAAACCA CGATGAACAT CAAACGCCTG ATGGACATCG GCTGCTACCG TGGCTTCCGC CATCGTCGTG GCTTGCCCAT GCGTGGCCAA CGCACCCGGA CGAACGCCCG TACCCGCAAG GGTCCGCGTA AGGCCGCTGC GTCTTTGAAG AAATAA
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Protein sequence | MARIAGINIP PQKHAEIGLT AIFGIGRTRA RKICEACEID YAKKIKDLTD SDLEKIRDHI AQFTIEGDLR RETTMNIKRL MDIGCYRGFR HRRGLPMRGQ RTRTNARTRK GPRKAAASLK K
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