| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0336 |
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| Symbol | rplR |
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| ID | 4688224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 336956 |
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| End bp | 337321 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639833328 |
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| Product | 50S ribosomal protein L18 |
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| Protein accession | YP_980580 |
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| Protein GI | 121603251 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0256] Ribosomal protein L18 |
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| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0037548 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00117224 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTTGACCA AAAAAGAGCA GCGCCTTCGT CGTTCACGCC AGACCCGCAT CCGCATTGCC
AATCAAGGCG TTGCCCGTCT GTCCGTGAAT CGCACCAATC TGCATATTTA CGCCAGTGTT
ATTTCTGGCG ACGGCACCAA GGTTCTGGCG TCTGCTTCCA CTGCTGAAGT GGAAGTGCGC
AATGAAATTG GCGGCTCGGG CAAGGGTGGA AATGTTGCTG CTGCGCAGGC CATTGGCAAG
CGTATTGCCG AAAAGGCAAA AGCAGCAGGT GTAGAAAAAG TGGCGTTTGA TCGCGCCGGT
TTTGCGTACC ATGGCCGCGT CAAAGCGCTG GCTGATGCGG CTCGCGAAGC CGGTTTGCAG
TTCTAA
|
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| Protein sequence | MLTKKEQRLR RSRQTRIRIA NQGVARLSVN RTNLHIYASV ISGDGTKVLA SASTAEVEVR
NEIGGSGKGG NVAAAQAIGK RIAEKAKAAG VEKVAFDRAG FAYHGRVKAL ADAAREAGLQ
F
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