| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0320 |
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| Symbol | tgt |
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| ID | 4687273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 321928 |
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| End bp | 323091 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639833312 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_980564 |
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| Protein GI | 121603235 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0464887 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGAAT TCGAAGTCCT GAAAACCGAC CCGGCGACCG TTGACAGCGA AGGCGCCTAC
CTCGGCTCCT ACGCCCGGCG CGGCCAATTG ACCCTGAACC ACGGCGTGGT GCAGACCCCG
ATCTTCATGC CCGTGGGCAC CTACGGCACC GTCAAGGGCG TGACGCCGCA GTCGCTGCAC
GACATGAACG CCCAGATCAT CCTGGGCAAC ACCTTTCACC TCTGGATGCG TCCCGGGCTG
GACGTGGTCG CGCAGTTCGG CGGGCTGCAC AAGTTCGAGA GCTGGCACAA GCCCATCCTG
ACCGACAGCG GCGGCTTCCA GGTCTGGTCG CTCGGCGAGA TGCGCAAGAT TTCGGAAGAA
GGCGTGAAGT TCGCCTCGCC GGTCAACGGC GACAAGCTGT TCCTGACGCC CGAAATCTCG
ATGCAGATCC AGACGCTGCT CAACAGCGAC ATCGTCATGC AGTTCGACGA ATGCACGCCT
TACGACACCA AGGGCCATAT CACCACCGAA GGCGAGGCGC GCAGCTCGAT GGAGCTGAGC
CGGCGCTGGG CCAAGCGCTG CGAGATTGAA TTCGACAAGC TGGAGAACCC GAACGCGCTG
TTCGGCATCG TGCAGGGCGG CATGTTCGAG AACCTGCGCC AGGAGTCGCT CGACGCGCTG
GTCGAGATGG ACTTTCCCGG TTACGCCGTC GGCGGCGTGA GCGTCGGCGA GCCCAAGGAA
GAAATGCTGC GCATCATGGC GCACACGCCG CACCGCCTGC CGGCGCATAA GCCGCGCTAC
CTGATGGGCG TGGGCACGCC CGAAGACCTG GTCGAGGGCG TGGCCTCGGG CGTCGATATG
TTCGACTGCG TGATGCCGAC GCGCAATGCG CGCAACGGCC ACATGTTCAC CCGCTTCGGC
GACCTGAAAA TCCGCAACGC CCGCTACAAG AGCGAAGAAG CACCAGTTGA CAGCACCTGC
GGCTGCTACA CCTGCCGCAA CTTCAGCCGC GCCTACATGC ACCACCTGGA CCGCTGCGGC
GAAATGCTCG GCCCCATGCT CAGCAGCATC CACAACCTGC ATTACTACCT GAACCTGATG
CAGGAAGTGC GGGGTGCGCT GGACGCCGGG CGCTTTGGCG AATTCGTGCG GCAGTTCAAG
GCCGACCGCC AGCGCGGAGT CTGA
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| Protein sequence | MLEFEVLKTD PATVDSEGAY LGSYARRGQL TLNHGVVQTP IFMPVGTYGT VKGVTPQSLH
DMNAQIILGN TFHLWMRPGL DVVAQFGGLH KFESWHKPIL TDSGGFQVWS LGEMRKISEE
GVKFASPVNG DKLFLTPEIS MQIQTLLNSD IVMQFDECTP YDTKGHITTE GEARSSMELS
RRWAKRCEIE FDKLENPNAL FGIVQGGMFE NLRQESLDAL VEMDFPGYAV GGVSVGEPKE
EMLRIMAHTP HRLPAHKPRY LMGVGTPEDL VEGVASGVDM FDCVMPTRNA RNGHMFTRFG
DLKIRNARYK SEEAPVDSTC GCYTCRNFSR AYMHHLDRCG EMLGPMLSSI HNLHYYLNLM
QEVRGALDAG RFGEFVRQFK ADRQRGV
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