| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0302 |
|---|
| Symbol | |
|---|
| ID | 4687768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 301458 |
|---|
| End bp | 302441 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639833294 |
|---|
| Product | fumarylacetoacetate (FAA) hydrolase |
|---|
| Protein accession | YP_980546 |
|---|
| Protein GI | 121603217 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTG CCACTTACAA GGACGCCTCG CGTGACGGCC AGCTGGTCGT GGTGTCGCGC
GATCTTTCCA GCGCCCATTA TGCGACCGGC ATCGCCAACA CCCTGCGCCA GGTGCTGGAC
GACTGGCGCT TCATGGCGCC GCAGCTGCGC GACCTGTCCG ACCTGCTCAA CAGTGGAAAA
GCGCGCCATG CCTTTCCGTT TGAGCCTGGG CGCTGCATGG CGCCGCTGCC GCGCGCCTGC
CAGTGGGTCG CGGGCCAGTC CTTCATCAGC CATGTGGAGC GCCTGCACAA GGCGACGGAT
GCGAAGCTGC CCAAAAGCCG CTACACCGAG CCGCTGATGC GCCAGGGCGG CGGCGACGGT
TTCATCGGTC CGTGCGACAA CATCGTCATC GCCAGCGACG CATCGGGCAT CGACTTCGAG
GCGCAGGTGG CCGTCATCAC TGGCGACGTG GCCATGGGCG CGAGCCCCGA GGAAGCGCTG
GACGGCATCC GCCTGCTGAT GCTGGCCAAC GACGTGTCCC TGCGCAAGCT GATGGCCGAT
GAGCAGGCCA ACGGTCTGGG TTATTTGCAG GGCAAGCCGA TGACCGCCTT CAGCCCGGTG
GCCGTCACGC CCGACGAGGT CGGCGACGCC TGGCGCCAGG GCCGGCTGAA CCTGACGCTG
CAAACCACCT GGAACGGCCG CAAGGTCGGC CTGTGCGATG CCGGCGCCGG CATGACGTTT
CACTTCGGCC AGCTGGTCTC GCATATGTGC AAGACCCGCC CGGCGAGCGC CGGCAGCATC
GTCGGCTCCG GCCCGGTCAG CAGCACCGAC TGGAGCCAGG GCTACGCTTG CATCGCTGAA
AAGCGCGCGG TTGAAAGCGT TGACAACGGC AGGGCCTCGA CCCGCTTCAT GAAGTTCGGC
GACACCCTGC GCATCGAGGC GAAGGGCAAG AACGGGCAGT CGGTGTTCGG GGCGATTGAG
CAGGAAATTA CGCCGGCGGG ATGA
|
|---|
| Protein sequence | MKLATYKDAS RDGQLVVVSR DLSSAHYATG IANTLRQVLD DWRFMAPQLR DLSDLLNSGK
ARHAFPFEPG RCMAPLPRAC QWVAGQSFIS HVERLHKATD AKLPKSRYTE PLMRQGGGDG
FIGPCDNIVI ASDASGIDFE AQVAVITGDV AMGASPEEAL DGIRLLMLAN DVSLRKLMAD
EQANGLGYLQ GKPMTAFSPV AVTPDEVGDA WRQGRLNLTL QTTWNGRKVG LCDAGAGMTF
HFGQLVSHMC KTRPASAGSI VGSGPVSSTD WSQGYACIAE KRAVESVDNG RASTRFMKFG
DTLRIEAKGK NGQSVFGAIE QEITPAG
|
|---|
| |