Gene Pnap_0263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0263 
Symbol 
ID4687051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp264032 
End bp264913 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content64% 
IMG OID639833256 
Productcytochrome c, class I 
Protein accessionYP_980509 
Protein GI121603180 
COG category[C] Energy production and conversion 
COG ID[COG3245] Cytochrome c5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAA ACGATCACAC CACGGCCCAC GCAGAAGCCC ACACGGGCCC GATTAAAACC 
CCCAAACAAC TGCTGGCGGC TGTTTTTTTC TCTTTCGTTG TTCCTGTTTT TGCAATTATC
GGGCTGGTTT ATTACGTCGC CTCGGCCGAT AAACCGCTGG CCGGCGCTGA TGACGCAGAA
CGGGCTGTGG CCGAGCGTAT CCAGAAAGTT GGCATGGTTG AAATCCGCGA TGCCAACCGC
CCCCTGAGGA CAGGCGAAGA AGTCTATAAA GGCCAGTGCA TTGCTTGCCA CGGCACAGGC
GCGGCAGGCT CTCCCAAGTT CGGCGATGCG GCAGCCTGGG CGCCCCGTAT CTCCACCGGC
TATGACGCAC TGCTGCATTC CGCGCTCAAG GGCAAGGGCG CCATGGCTGC GCAGAGCGGC
GGAGACTTTC AGGATATCGA AATCGGCCGC GCCGTGGTGT ACATGACCAC AGCCGCAGGC
GGCAAGTTTG CCGAACCTGC CGTGCCTGCC GCCGGCGCGG CTGATGCGCC AGCGGCTGAT
GCTGCGGCCG CCACGCCAGC AGCAGCTCCG GTTACCGCAG TTGCAGCGAC ACCTGCCGCA
GCGACCGCGC CGGCAGCAAC TGCCAAGGTT GCCGCAACCG ACACAGGCGC TGGCGAGGCG
CTGTACAAAC AGGCTTGCTT CGCCTGCCAC GGCGCAGGCG TGGCCGGTGC GCCCAAGTTT
GGCGACAAGG CCGCCTGGGC TCCGCGCATC CAGACCGGCG TTGACGCGTT GACAGCCAGC
GCCATCAAAG GCAAGGGCGC CATGCCGCCC AAGGGGGGCT CTGCCGCCTC TGACGCAGAC
ATCCACTTGG CCGTTGTTTA CATGGTGAGC GCGGTCAAAT AA
 
Protein sequence
MSANDHTTAH AEAHTGPIKT PKQLLAAVFF SFVVPVFAII GLVYYVASAD KPLAGADDAE 
RAVAERIQKV GMVEIRDANR PLRTGEEVYK GQCIACHGTG AAGSPKFGDA AAWAPRISTG
YDALLHSALK GKGAMAAQSG GDFQDIEIGR AVVYMTTAAG GKFAEPAVPA AGAADAPAAD
AAAATPAAAP VTAVAATPAA ATAPAATAKV AATDTGAGEA LYKQACFACH GAGVAGAPKF
GDKAAWAPRI QTGVDALTAS AIKGKGAMPP KGGSAASDAD IHLAVVYMVS AVK