| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0253 |
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| Symbol | |
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| ID | 4687746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 255082 |
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| End bp | 256635 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639833246 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | YP_980499 |
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| Protein GI | 121603170 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.231665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTCA ATCCCGCAGA AATTTCTGAA CTGATCAAGA GCCGTATCGA AGGCCTCGCC
GCAAGCAGCG ACATCCGTAA CCAGGGCACC GTGGTGTCGG TGGCCGACGG TATTGTCCGC
ATCCACGGCC TGTCCGATGT GATGCAGGGC GAAATGCTTG AATTTCCCGC CACAGCCGAT
GGCACGCCAA CCTATGGTCT GGCGCTGAAT CTTGAGCGCG ACTCGGTCGG CTCCGTGATT
CTGGGCGAGT ACGAACACAT TGCCGAAGGC GACACCGTCA AATGCACGGG TCGTATTCTG
GAAGTCCCGA TTGGTCCTGA ACTGCTTGGC CGCGTGGTCA ATGCACTGGG TCAGCCCATC
GACGGCAAAG GCCCGATCAA CGCCAAGCTG AGCGACGTGA TTGAAAAGGT CGCGCCAGGC
GTGATTGCCC GTAAATCGGT TGACCAGCCA CTGCAAACCG GCCTGAAGTC CATCGACTCG
ATGGTGCCTA TCGGCCGTGG CCAGCGCGAA CTGATCATTG GCGACCGCCA GACCGGCAAG
ACCGCGGTTG CGATTGACGC CATCATCAAC CAAAAGGGCA AGGGCGTTTC ATGCGTCTAT
GTCGCGATTG GCCAGAAGGC TTCCTCGATC AAGAACGTGG TGCGCTCGCT GGAACAAGCC
GGTGCCATGG ACTACACCAT CGTGGTGGCA GCCTCGGCTT CCGAATCTGC CGCCATGCAA
TACGTCAGCG CCTACTCGGG CTGCACCATG GGCGAATACT TCCGCGACCG TGGCGAAGAC
GCGCTGATTG TGTATGACGA CCTGTCCAAG CAAGCCGTCG CCTACCGTCA GGTATCGCTG
CTGCTGCGCC GTCCGCCAGG CCGCGAAGCC TACCCTGGCG ACGTGTTCTA TCTCCACAGC
CGTCTGCTGG AACGCGCAGC CCGCGTGAAC GAGAAGTATG TTGAAGACTT CACCAAAGGC
GCCGTGAAAG GCAAGACAGG TTCATTGACC GCACTGCCGA TCATTGAAAC GCAAGCCGGC
GACGTGTCAG CTTTCGTGCC GACCAACGTG ATCTCGATCA CCGACGGCCA GATTTTCCTG
GAAACCAGCC TGTTCAACGC CGGTATCCGT CCTGCGATCA ACGCCGGTAT CTCGGTGTCG
CGCGTCGGTG GCGCCGCCCA GACCAAGCTG ATCAAGAACC TGTCCGGCGG TATCCGTACC
GACCTGGCCC AGTACCGGGA ACTGGCTGCC TTTGCGCAGT TCGCATCCGA CCTGGACGAA
GCCACCCGCA AGCAGCTGGA CCGTGGTGCC CGCGTCACGG AGTTGCTCAA GCAGTCGCAG
TATTCGCCTT TGTCCGTCTC CACCATGGGT GCCACCTTGT TCGCAGTGAA CAAGGGCTTC
ATGGATGATG TAGATGTCAA GAAGGTGCTG GCTTTCGAAA GCGGTCTGCA CGCTTGGCTG
AAGGACAAGC ATGCGCCCTT GATGGCCAAG CTTGAAGCCA ACAAAGCCAT GGACAAGGAT
GCCGAGGCCG AGTTGACGAC AGCGGTCACT GCGTTCAAGA AATCGTTTGC CTAA
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| Protein sequence | MQLNPAEISE LIKSRIEGLA ASSDIRNQGT VVSVADGIVR IHGLSDVMQG EMLEFPATAD
GTPTYGLALN LERDSVGSVI LGEYEHIAEG DTVKCTGRIL EVPIGPELLG RVVNALGQPI
DGKGPINAKL SDVIEKVAPG VIARKSVDQP LQTGLKSIDS MVPIGRGQRE LIIGDRQTGK
TAVAIDAIIN QKGKGVSCVY VAIGQKASSI KNVVRSLEQA GAMDYTIVVA ASASESAAMQ
YVSAYSGCTM GEYFRDRGED ALIVYDDLSK QAVAYRQVSL LLRRPPGREA YPGDVFYLHS
RLLERAARVN EKYVEDFTKG AVKGKTGSLT ALPIIETQAG DVSAFVPTNV ISITDGQIFL
ETSLFNAGIR PAINAGISVS RVGGAAQTKL IKNLSGGIRT DLAQYRELAA FAQFASDLDE
ATRKQLDRGA RVTELLKQSQ YSPLSVSTMG ATLFAVNKGF MDDVDVKKVL AFESGLHAWL
KDKHAPLMAK LEANKAMDKD AEAELTTAVT AFKKSFA
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