Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0221 |
Symbol | |
ID | 4686192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 225998 |
End bp | 227326 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639833214 |
Product | hypothetical protein |
Protein accession | YP_980467 |
Protein GI | 121603138 |
COG category | [S] Function unknown |
COG ID | [COG2733] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.124375 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGCGG CCGCGCGCCA AACGGCTAGA CTGCCCGGCA TGCAATCCCC TACCGAAATT CAACAGCATC TGGACTCCGT CGAAGATGCC TTCAGGCGCG CCCGGCTGCG CGCCATGCAG CGGGTGGCCG GCGGCCTGCT GTTGCTGGCC TTTGCGGTGT TTTGCCTGGC CCGCAGCCTG TCCGGGCTGC ATCCCGCCTG GGGCTATGTG GAAGCTTTTG CCGAAGCGGC CATGGTCGGC GCGGTGGCGG ACTGGTTTGC CGTCGTCGCG CTGTTTCGCC ATCCGCTGGG CATTCCGGTG TGGCACACGG CCATCATTGC GAACAGCAAG GACGACATCG GGCGCAATCT GGGCCAGTTT GTCGAAAGCT ATTTCGTGAC CGAAGAAGGC ATTGCCCAGC GCATCCGGCA GGCCAACCCG GCCGGCCTGC TCGGCGCCTG GCTGCTGGCG CCCGGCCATG CGGCGCAGCT GGGCCATGCC ACGGCCAAAG CCTTGAAGGC ACTGCTCAAT GCCCTGGATG ACCCATCGAT GAGCCAGTTG CTGAAGGATG CGGCCGCCGG GCAGCTGGCC CGCTTCGACA TCTCGGCCAA CGCCGGGCAA CTGCTGGACC TGCTGGTGGC CGAGGGCAAG CACCAGCAAT TGCTCAACAG CGTGTTGCAC AGCCTGGGCG ACTACCTGAG CGAGGAAACC AACCAGCAGC AGGCCACCGA TTTCCTGATT GCCGCGTTCG GCGTCGAAAA CGTGCTCTAC AAGGTCGGAA CGGCCGCCAT CGGTCCGAGG GCGTTGCGCT CGCTGAGCCG GTCGGCCCAT GAGGTGCTGG AAGACCCCGC GCATCCGGCC CGCGAGCGTT TCAACGGCTG GGTGCAAAAC TTCGTGCTGC ACCTCAAGGA CGATCCGCAA TGGCGGGAGT TCATCGTCAG GCACCAGCAG GACACCCTGG CCAATGAACG GGTGCAGGCC TTGCTCGGCG GCCTGTGGGG CCGGGTCAAG GCGCGCCTGC TCGATGACCT GGGCCGGGAC GATCCGGCCA TGGCCCGGCA GATTTCGGTG CTGGCGCGCA AGGTCGGGCA AGCGCTGGCG CAGGATGCGC GGCTGGTCGA GGGGCTCAAC GGCGCCATCG AGTCGGGCAG CGTCCTGCTG GTGCGCAATT ACCGGGGCGA GGTGGGGCAC TTCATCGAGG CGAAACTGGC CCAGTGGACG CGCGAGGAAA TGACCGACCG CATCGAACTG GCCATCGGGC GTGACCTGCA GTTCATCCGC ATCAACGGCA CGCTGGTTGG CGGGCTGGTC GGGCTGGCCA TCTACAGCGT GACCCGTTTG CTCGGTTGA
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Protein sequence | MQAAARQTAR LPGMQSPTEI QQHLDSVEDA FRRARLRAMQ RVAGGLLLLA FAVFCLARSL SGLHPAWGYV EAFAEAAMVG AVADWFAVVA LFRHPLGIPV WHTAIIANSK DDIGRNLGQF VESYFVTEEG IAQRIRQANP AGLLGAWLLA PGHAAQLGHA TAKALKALLN ALDDPSMSQL LKDAAAGQLA RFDISANAGQ LLDLLVAEGK HQQLLNSVLH SLGDYLSEET NQQQATDFLI AAFGVENVLY KVGTAAIGPR ALRSLSRSAH EVLEDPAHPA RERFNGWVQN FVLHLKDDPQ WREFIVRHQQ DTLANERVQA LLGGLWGRVK ARLLDDLGRD DPAMARQISV LARKVGQALA QDARLVEGLN GAIESGSVLL VRNYRGEVGH FIEAKLAQWT REEMTDRIEL AIGRDLQFIR INGTLVGGLV GLAIYSVTRL LG
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