Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0204 |
Symbol | rplD |
ID | 4689949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 215554 |
End bp | 216174 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639833197 |
Product | 50S ribosomal protein L4 |
Protein accession | YP_980450 |
Protein GI | 121603121 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGTCG AACTCCTGAA TGACCAGGGT CTGTCATCGT CCAAAGTGGA CGTGTCCGAC ACCGTTTTTG GTCGCGAATA CAACGAAAGC CTGATTCATC AGGTGATCGT GGCCTTCCAG GCCAACGCCC GCCAGGGCAC CCGTGCCCAG AAGGACCGTG AGCAGGTTCG TCACTCGACC AAGAAGCCTT TTAAACAAAA GGGCACTGGC CGCGCACGTG CAGGTATGAC GTCTTCCCCG CTGTGGCGCG GAGGCGGTCG TATTTTCCCG AACATGCCTG ATGAAAACTT CACGCACAAG ATCAACAAGA AAATGTATCG TGCCGGCATG GCTTCGATCT TTTCGCAGCT GGCGCGCGAA GGCCGCCTGG CTGTGGTTGA TTCCCTGACC GTGGATTCAC CCAAGACGAA AGTTCTGGCT GACAAATTCA AGGCCATGAA CCTCAACTCG GTGCTGGTGA TTGCTGATCA GGTTGATGAA AACCTGTACC TGGCATCGCG CAATCTGGTC AACATCCTGG TTGTTGAGCC CCGCTATGCC GACCCGCTGT CACTGGTGCA CTACAAAAAG GTGCTCGTGA CCAAGGCTGC CATGGACCAA CTCAAGGAGA TGTTCGCATG A
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Protein sequence | MQVELLNDQG LSSSKVDVSD TVFGREYNES LIHQVIVAFQ ANARQGTRAQ KDREQVRHST KKPFKQKGTG RARAGMTSSP LWRGGGRIFP NMPDENFTHK INKKMYRAGM ASIFSQLARE GRLAVVDSLT VDSPKTKVLA DKFKAMNLNS VLVIADQVDE NLYLASRNLV NILVVEPRYA DPLSLVHYKK VLVTKAAMDQ LKEMFA
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