Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0198 |
Symbol | rpsL |
ID | 4687664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 209585 |
End bp | 209962 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639833191 |
Product | 30S ribosomal protein S12 |
Protein accession | YP_980444 |
Protein GI | 121603115 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0048] Ribosomal protein S12 |
TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000216597 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAACCA TCAATCAATT AGTTCGTCAG GGGCGCGAGG TCGAAAAGAT CAAGTCAAAA AGCCCTGCGA TGGAAAATTC TCCACAGCGC CGCGGTGTTT GCACCCGTGT TTACACCACG ACGCCTAAAA AGCCAAACTC CGCTCTGCGT AAAGTCGCCA AGGTGCGCCT GACCAACGGG TTCGAGATCA TTTCCTACAT CGGCGGCGAA GGCCACAATC TGCAGGAACA CAGCGTGGTG CTGGTTCGCG GCGGCCGGGT CAAGGATTTG CCGGGTGTGC GTTACCACAT CGTTCGTGGC TCGCTCGATT TGCAAGGCGT GAAAGACCGC AAGCAGTCGC GTTCCAAGTA CGGCGCGAAG CGTCCAAAGG CCAAATAA
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Protein sequence | MPTINQLVRQ GREVEKIKSK SPAMENSPQR RGVCTRVYTT TPKKPNSALR KVAKVRLTNG FEIISYIGGE GHNLQEHSVV LVRGGRVKDL PGVRYHIVRG SLDLQGVKDR KQSRSKYGAK RPKAK
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