Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0171 |
Symbol | gatA |
ID | 4689513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 182392 |
End bp | 183924 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639833164 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
Protein accession | YP_980417 |
Protein GI | 121603088 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAGCA TTCCCCTGAC CCCGTCAAAT CTCGACCTGC ACGACCTCGG CGTCGCGCAA CTGGCCGCCA AACTGGCCGC CGGTGACATC TCCAGCGTCG AAGTCACCCA GCATTTCCTG AACCGCATCG GGCAGCACGC CGGTCTGGGC GCCTTCCTGG CCCTTGACGC CGACGTGTCG CTGGCGCAGG CCCGGGCCGC CGACGCGCGG CTGGCCGCCG GCGAGCGCAC GCCCTTGCTG GGCGTGCCGC TGGCGCACAA GGACGTGTTC GTCACGCGCG ACTTCCCGAC CACCGCCGGC TCGAAGATGC TCGCCAACTA CCGCAGCCCG TTCGACGCGA CCGTGGTCAG CCGGCTGGGC GTTGGCCCAG GTGGCGCCGG CATGGTCACG CTGGGCAAGC TCAACTGCGA CGAGTTCGCC ATGGGTTCGG GCAATGAAAA CAGCGCCTAT CAAAAGGTGC AAAACCCGTG GGACACCAGC CGCGTTCCGG GCGGCTCCTC GGGCGGCTCG GCGGCGGCGG TGGCCGCGCG GCTCGTTCCT GCAGCGACTG GCACCGATAC CGGCGGCTCG ATTCGCCAGC CCGCATCGCT GACCGGCATC ACCGGCATCA AGCCGACCTA CGGCCGCTGC TCGCGCTATG GCATGGTGGC GTTTGCCTCC AGCCTGGACC AGGCCGGCCC GATGGCGCGC AGCGCGCTGG ACTGCGCGCT GCTGCTGTCC GCCATGGCCG GGCCTGACCC CGACCGCGAT TCGACCTCGC TGGACATGCC GGCCGTCGAT TACGCTACTG ATTTAATAGC TGCTCGCACA GATGGGACAA GCGCAAAGCC CCTGAAAGGC TTGAGAATCG GCCTGCCGAC GCAGTTTTTC GGCGCGGGCT GCGCGCCCGA CGTGCTGGCC GCCGTGCGCG GCGCGCTCAG CGAGTTTGAA AAGCTCGGCG CCACGCTGGT CGATGTCAGC CTGCCGCTGA CCGAGCTGTC GATTCCGGTC TATTACGTGA TTGCCCCGGC CGAGGCCAGC AGCAACCTGA GCCGCTTCGA CGGCGTGCGC TACGGCCACC GCGCCGCGCA CTACACCGAC CTGACCGACA TGTACAAAAA GTCGCGTTCG GAAGGCTTTG GCGACGAAGC CACGCGCCGC ATCATGATCG GCACCTACGT GCTGTCGCAC GGCTACTACG ACGCCTACTA CTTGAAGGCG CAAAAAATCC GCCGCCTGAT CGCGCAGGAC TTCCAGACCG CTTTTGCGCA ATGCGACGTG ATTGCCGGGC CGGTGTCGCC CACGGTGGCC TGGAAAATCG GCGAAAAATC CGACGACCCG GTCGCCAGCT ACCTGGCCGA CATCTACACG TTGTCGTCGA GCCTGGCCGG CCTGCCCGGC ATGAGTGTTC CGGCCGGCTT CGGCGCGGGC GGCATGCCGG TCGGCCTGCA GCTGATCGGC AACTACTTCA AGGAAGCGCA GCTGCTGGGC GCGGCGCACC AGTTCCAGCT GGCGACCGAC TGGCACCAGA AAGCACCGGG AATTTCCGCA TGA
|
Protein sequence | MSSIPLTPSN LDLHDLGVAQ LAAKLAAGDI SSVEVTQHFL NRIGQHAGLG AFLALDADVS LAQARAADAR LAAGERTPLL GVPLAHKDVF VTRDFPTTAG SKMLANYRSP FDATVVSRLG VGPGGAGMVT LGKLNCDEFA MGSGNENSAY QKVQNPWDTS RVPGGSSGGS AAAVAARLVP AATGTDTGGS IRQPASLTGI TGIKPTYGRC SRYGMVAFAS SLDQAGPMAR SALDCALLLS AMAGPDPDRD STSLDMPAVD YATDLIAART DGTSAKPLKG LRIGLPTQFF GAGCAPDVLA AVRGALSEFE KLGATLVDVS LPLTELSIPV YYVIAPAEAS SNLSRFDGVR YGHRAAHYTD LTDMYKKSRS EGFGDEATRR IMIGTYVLSH GYYDAYYLKA QKIRRLIAQD FQTAFAQCDV IAGPVSPTVA WKIGEKSDDP VASYLADIYT LSSSLAGLPG MSVPAGFGAG GMPVGLQLIG NYFKEAQLLG AAHQFQLATD WHQKAPGISA
|
| |