Gene Pnap_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0171 
SymbolgatA 
ID4689513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp182392 
End bp183924 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content67% 
IMG OID639833164 
Productaspartyl/glutamyl-tRNA amidotransferase subunit A 
Protein accessionYP_980417 
Protein GI121603088 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID[TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCA TTCCCCTGAC CCCGTCAAAT CTCGACCTGC ACGACCTCGG CGTCGCGCAA 
CTGGCCGCCA AACTGGCCGC CGGTGACATC TCCAGCGTCG AAGTCACCCA GCATTTCCTG
AACCGCATCG GGCAGCACGC CGGTCTGGGC GCCTTCCTGG CCCTTGACGC CGACGTGTCG
CTGGCGCAGG CCCGGGCCGC CGACGCGCGG CTGGCCGCCG GCGAGCGCAC GCCCTTGCTG
GGCGTGCCGC TGGCGCACAA GGACGTGTTC GTCACGCGCG ACTTCCCGAC CACCGCCGGC
TCGAAGATGC TCGCCAACTA CCGCAGCCCG TTCGACGCGA CCGTGGTCAG CCGGCTGGGC
GTTGGCCCAG GTGGCGCCGG CATGGTCACG CTGGGCAAGC TCAACTGCGA CGAGTTCGCC
ATGGGTTCGG GCAATGAAAA CAGCGCCTAT CAAAAGGTGC AAAACCCGTG GGACACCAGC
CGCGTTCCGG GCGGCTCCTC GGGCGGCTCG GCGGCGGCGG TGGCCGCGCG GCTCGTTCCT
GCAGCGACTG GCACCGATAC CGGCGGCTCG ATTCGCCAGC CCGCATCGCT GACCGGCATC
ACCGGCATCA AGCCGACCTA CGGCCGCTGC TCGCGCTATG GCATGGTGGC GTTTGCCTCC
AGCCTGGACC AGGCCGGCCC GATGGCGCGC AGCGCGCTGG ACTGCGCGCT GCTGCTGTCC
GCCATGGCCG GGCCTGACCC CGACCGCGAT TCGACCTCGC TGGACATGCC GGCCGTCGAT
TACGCTACTG ATTTAATAGC TGCTCGCACA GATGGGACAA GCGCAAAGCC CCTGAAAGGC
TTGAGAATCG GCCTGCCGAC GCAGTTTTTC GGCGCGGGCT GCGCGCCCGA CGTGCTGGCC
GCCGTGCGCG GCGCGCTCAG CGAGTTTGAA AAGCTCGGCG CCACGCTGGT CGATGTCAGC
CTGCCGCTGA CCGAGCTGTC GATTCCGGTC TATTACGTGA TTGCCCCGGC CGAGGCCAGC
AGCAACCTGA GCCGCTTCGA CGGCGTGCGC TACGGCCACC GCGCCGCGCA CTACACCGAC
CTGACCGACA TGTACAAAAA GTCGCGTTCG GAAGGCTTTG GCGACGAAGC CACGCGCCGC
ATCATGATCG GCACCTACGT GCTGTCGCAC GGCTACTACG ACGCCTACTA CTTGAAGGCG
CAAAAAATCC GCCGCCTGAT CGCGCAGGAC TTCCAGACCG CTTTTGCGCA ATGCGACGTG
ATTGCCGGGC CGGTGTCGCC CACGGTGGCC TGGAAAATCG GCGAAAAATC CGACGACCCG
GTCGCCAGCT ACCTGGCCGA CATCTACACG TTGTCGTCGA GCCTGGCCGG CCTGCCCGGC
ATGAGTGTTC CGGCCGGCTT CGGCGCGGGC GGCATGCCGG TCGGCCTGCA GCTGATCGGC
AACTACTTCA AGGAAGCGCA GCTGCTGGGC GCGGCGCACC AGTTCCAGCT GGCGACCGAC
TGGCACCAGA AAGCACCGGG AATTTCCGCA TGA
 
Protein sequence
MSSIPLTPSN LDLHDLGVAQ LAAKLAAGDI SSVEVTQHFL NRIGQHAGLG AFLALDADVS 
LAQARAADAR LAAGERTPLL GVPLAHKDVF VTRDFPTTAG SKMLANYRSP FDATVVSRLG
VGPGGAGMVT LGKLNCDEFA MGSGNENSAY QKVQNPWDTS RVPGGSSGGS AAAVAARLVP
AATGTDTGGS IRQPASLTGI TGIKPTYGRC SRYGMVAFAS SLDQAGPMAR SALDCALLLS
AMAGPDPDRD STSLDMPAVD YATDLIAART DGTSAKPLKG LRIGLPTQFF GAGCAPDVLA
AVRGALSEFE KLGATLVDVS LPLTELSIPV YYVIAPAEAS SNLSRFDGVR YGHRAAHYTD
LTDMYKKSRS EGFGDEATRR IMIGTYVLSH GYYDAYYLKA QKIRRLIAQD FQTAFAQCDV
IAGPVSPTVA WKIGEKSDDP VASYLADIYT LSSSLAGLPG MSVPAGFGAG GMPVGLQLIG
NYFKEAQLLG AAHQFQLATD WHQKAPGISA