| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0170 |
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| Symbol | gatB |
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| ID | 4689203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 180938 |
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| End bp | 182395 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639833163 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_980416 |
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| Protein GI | 121603087 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.849814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAA CCACCAAATC CCTGCTGGTG CAAGGCTACG AAGTCGTCAT CGGCTTTGAA
ACCCACACCC AACTCACCAC GCAATCGAAG CTGTTCAGCC GCGCGCCCAT TGCCTTTGGC
GCCGAGCCGA ACACCCAAGC GTCCGCCGTC GATTTCGCGC TGCCCGGCGC GCTGCCGGTG
ATGAACAAGG GCGCGGTGCA GCGCGCCATC GAGTTCGGCC TGGCGGTGAA CGCGCACATC
GCCGAAAAAA GCATCTTCGC GCGCAAGAAC TATTTCTACC CCGACCTGCC CAAGGGCTAC
CAGATCAGCC AGTTCGAGAT TCCTGTCGTG CAGGGCGGCG TGGTCGAATT CTTCCTGGAC
GGCGAGAAAA AATCCGTGCG CCTGGTGCGT GCCCACCTCG AAGAAGACGC GGGCAAGTCG
CTGCATGAAG ACTTCATCGG CATGAGCGGC ATCGACCTGA ACCGCGCCGG AACGCCGCTG
CTGGAGATCG TCACCGAACC CGACATGCGC TCGACCGCCG AGGCGGTGGC CTATGCCAAG
GAGCTGCACA AGATCGTCAC CTGGATCGGC ATCTGCGACG GCAACATGCA GGAAGGCAGC
TTTCGCTGCG ACGCCAACGT CTCGGTGCGC AAGCCCGGCG AGCCGCTGGG CACGCGCCGC
GAGATCAAGA ACCTGAACAG CTTCAAGTTC ATGCAGCAGG CCATGGACTA CGAAGTGCGC
TGGCAGATCG AGCAGATCGA GGACGGCCAC GAAATCCAGC AGGCGACCGT GCTGTTCGAC
CCGGACACGG GCGAGACGCG CAGCATGCGC AGCAAGGAAG ACGCCGCCGA TTACCGCTAT
TTCCCCGACC CGGATTTGCC GCCGCTGGTG ATTGGCCGGG ACTGGGTGGA AAAGACCCGC
TCGGAAATGT CGGAACTGCC GCGCGTGATG GCGGCGCGCT TCGTGGCCGA CTACGGTTTG
CCCGAATACG ATGCCGGCCA GCTCACGCAG AGCAAGGCGA CGGCGGCTTA CTTCGAGGCC
GTGGCGACCG CCAGCAAAAG CCCCAAGCTG GCCAGCAACT GGGTCATGGG CGAGCTGTCG
CGCCGCCTCA ATGCTGAAGA AAAATCGATC GAGGCTTCTG CGGTCAGCGC GCTGCAACTG
GCTGCGCTGA TTGGCCGAAT TGCCGACGGC ACGATTGCCA ACAACGCCGC CCGGCAGGTG
TTTGACGCCT TGTGGACCGG CGAAGGCCTG GACGTTGACG CGCTGATCGA AGCCAAGGGC
CTCAAGTCGA TGAGCGACAC CGGCGAACTC GAAACCATCA TCGACGGCGT GCTGGCGGCC
AACGCCAAAA ACGTCGAGGA AGTCAAAGCC GGCAATGCCA AAGCCTTCAA CGCGCTGGTC
GGCCAGGCCA TGAAGGCCAC CAAGGGCAAG GCCAATCCGG CGCAGGTCAA TGAACTGCTG
AAGAAAAAAC TGGGCTGA
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| Protein sequence | MSKTTKSLLV QGYEVVIGFE THTQLTTQSK LFSRAPIAFG AEPNTQASAV DFALPGALPV
MNKGAVQRAI EFGLAVNAHI AEKSIFARKN YFYPDLPKGY QISQFEIPVV QGGVVEFFLD
GEKKSVRLVR AHLEEDAGKS LHEDFIGMSG IDLNRAGTPL LEIVTEPDMR STAEAVAYAK
ELHKIVTWIG ICDGNMQEGS FRCDANVSVR KPGEPLGTRR EIKNLNSFKF MQQAMDYEVR
WQIEQIEDGH EIQQATVLFD PDTGETRSMR SKEDAADYRY FPDPDLPPLV IGRDWVEKTR
SEMSELPRVM AARFVADYGL PEYDAGQLTQ SKATAAYFEA VATASKSPKL ASNWVMGELS
RRLNAEEKSI EASAVSALQL AALIGRIADG TIANNAARQV FDALWTGEGL DVDALIEAKG
LKSMSDTGEL ETIIDGVLAA NAKNVEEVKA GNAKAFNALV GQAMKATKGK ANPAQVNELL
KKKLG
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