Gene Pnap_0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0162 
Symbol 
ID4687831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp170874 
End bp171479 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content67% 
IMG OID639833155 
ProductTetR family transcriptional regulator 
Protein accessionYP_980408 
Protein GI121603079 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATG AACACACCGA TGTCAAACAG CACATCCTCG ACACCGGACG CAGCATCATC 
CTGGGCAAGG GCTTTTCGGC CGTGGGCCTG AACGAAATCC TGTCCACCGC CCAGGTGCCC
AAGGGCTCGT TCTACCACTA CTTCAAGTCC AAGGAAGCGT TTGGCGAGGC GCTGGTGGAC
GGCTATGTGG CCGACTACCT GGCGCAGGTG GACCGGCTGC TCCAGGACGA CGGCGCCCCG
GCCGCAGAGC GTTTGATGCG CTACTGGCGC AGCTGGATGA CGCCCGCCGA CAGCCAGAGC
GCCGAATGCA ACTGCCTGGT CGTGAAGCTC AGCGGCGAGG TCTCGGACAT GTCCGAGGCG
ATGCGCGCGG CCTTGCTGCG CGGCACCAAT TTGATCATCG AGCGGCTGGG CAACTGCATT
GCGCAGGGCC TGGCCGACGG CTCGCTGACC GGCACCCTGG AGGCGCAGCA CACCGCGCTG
ACGCTGTACG AGTTGTGGCT GGGCGCGGCC CTGCTGACCA AGGTCAGGCG CGAGCGCAGC
GCGCTGGATG CGGCCATGGC GGCGACCTGC AGCCTGCTGA AGCTGCCGCA GCCGGTGAGC
GCCTGA
 
Protein sequence
MSNEHTDVKQ HILDTGRSII LGKGFSAVGL NEILSTAQVP KGSFYHYFKS KEAFGEALVD 
GYVADYLAQV DRLLQDDGAP AAERLMRYWR SWMTPADSQS AECNCLVVKL SGEVSDMSEA
MRAALLRGTN LIIERLGNCI AQGLADGSLT GTLEAQHTAL TLYELWLGAA LLTKVRRERS
ALDAAMAATC SLLKLPQPVS A