Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0153 |
Symbol | |
ID | 4686183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 164219 |
End bp | 165061 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639833146 |
Product | peptidase M48, Ste24p |
Protein accession | YP_980399 |
Protein GI | 121603070 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0497682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCTTCT TATGCGACGT CAAACACTCA GCCTGGCACA GCCGCCGGGG ATTTTTACAG GCCGCCGCAG GCGCCACGGC GCTGGCCGTC AGCACCCCGT TGCTGGCGCA GGTGGACGTG GGCAAGTCGT CCGGCCTGCG CAACCTGGTG CCGGCCGAGG AACTCGAAAG CGCCTCCACC CAGGAATACG CCAAGCTGCT GGCCGAGGCC AAGGCCCAGG GCGCGCTGGC ACCGCCCGGC CATCCGCAGC TGCAGCGCCT GCACGCCATC TCCAAGCGCC TGATCCCGCA GGCCGCGCAA TGGAACGACC GGGCCAAACA ATGGCGCTGG GAAGTCAACC TGATCGGCAG CAAGCAGATC AATGCGTTTT GCATGCCGGG CGGAAAAATC GCTTTTTACA CCGGCATCCT GGAGCAACTC AAGCTCACCG ACGACGAAGT CGCCATGATC ATGGGCCACG AAATGGCCCA CGCGCTGCGC GAGCATGCGC GCGCCCGCAT CGCCAAGAGC CAGGGCACCG GCACGCTGCT GTCGCTGGGC GCGCAACTGC TGGGGCTGGG CCAGCTGGGC GATCTGGCGG CCAATGTCGG CACCGAACTG CTGACGCTGC GCTTTAGCCG CGAGGACGAA AGCGACGCCG ACCTGGTCGG GCTGGAACTG GCCGCGCGCG GCGGCTACAA CCCGCAGGCC GCCGTCAGCC TGTGGCAAAA AATGGCGCAG GCCGGCGGCG GCGCTGGCGG GCCGAATTTT CTGTCCACGC ATCCGTCAGG TCCGCAGCGC ATCCAGGAAC TCCAGGCCAA CGTGCCCCGG GTGCAGGGCT TGTACGAACG GGCGCGCCGC TAG
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Protein sequence | MCFLCDVKHS AWHSRRGFLQ AAAGATALAV STPLLAQVDV GKSSGLRNLV PAEELESAST QEYAKLLAEA KAQGALAPPG HPQLQRLHAI SKRLIPQAAQ WNDRAKQWRW EVNLIGSKQI NAFCMPGGKI AFYTGILEQL KLTDDEVAMI MGHEMAHALR EHARARIAKS QGTGTLLSLG AQLLGLGQLG DLAANVGTEL LTLRFSREDE SDADLVGLEL AARGGYNPQA AVSLWQKMAQ AGGGAGGPNF LSTHPSGPQR IQELQANVPR VQGLYERARR
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