Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0143 |
Symbol | |
ID | 4687033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 153075 |
End bp | 153602 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639833136 |
Product | spore coat U domain-containing protein |
Protein accession | YP_980389 |
Protein GI | 121603060 |
COG category | [S] Function unknown |
COG ID | [COG5430] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.294291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACATC CCTCGTCAAG GCCTCCAGCC CGCAAGATAC CGGTCCTGCC GTCAGCGCTG TTTTTGCTGC TTGCGACCGC CGGGCCAGCC CAGGCGGGCA GTTGCACCGT GGGTTCGAGC GGGCTGGCTT TTGGCGCCTA CCAGCCCCTG ACGTTTGCGG GCAAGCTCAC TTCATCGGCC GTGACCAGCA ACGCCAGCAT TTCGGTGGTC TGCACCGGCA TTGCCAGCGG CGGCGCCTAC AGCATTGCCC TGGGGCCGAG CACCACCGGC AGCGGCGACC GCATCAGCAC GCGCTACCTG GGCAACAGCA ATGGCGGCGA CGACATGAGC TTCAACATCT ACACCAGCGC GAGTTATTCG ACCGTCTGGG GTAACGGCAC GACGGGCGGC CTTGTGGGCG GGAGCATTCC TGTTGGCGAC AGCAACCAGT CGCAACCCGT GTACGGCAGG ATTGCGGCGA GCCAGAACAC GCTCAGGGCC GGCAGCTATT CAGGCTCGCT GACCATGACG CTGACCTACA ACCCCTAG
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Protein sequence | MRHPSSRPPA RKIPVLPSAL FLLLATAGPA QAGSCTVGSS GLAFGAYQPL TFAGKLTSSA VTSNASISVV CTGIASGGAY SIALGPSTTG SGDRISTRYL GNSNGGDDMS FNIYTSASYS TVWGNGTTGG LVGGSIPVGD SNQSQPVYGR IAASQNTLRA GSYSGSLTMT LTYNP
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