Gene Pnap_0143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0143 
Symbol 
ID4687033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp153075 
End bp153602 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content65% 
IMG OID639833136 
Productspore coat U domain-containing protein 
Protein accessionYP_980389 
Protein GI121603060 
COG category[S] Function unknown 
COG ID[COG5430] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.294291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACATC CCTCGTCAAG GCCTCCAGCC CGCAAGATAC CGGTCCTGCC GTCAGCGCTG 
TTTTTGCTGC TTGCGACCGC CGGGCCAGCC CAGGCGGGCA GTTGCACCGT GGGTTCGAGC
GGGCTGGCTT TTGGCGCCTA CCAGCCCCTG ACGTTTGCGG GCAAGCTCAC TTCATCGGCC
GTGACCAGCA ACGCCAGCAT TTCGGTGGTC TGCACCGGCA TTGCCAGCGG CGGCGCCTAC
AGCATTGCCC TGGGGCCGAG CACCACCGGC AGCGGCGACC GCATCAGCAC GCGCTACCTG
GGCAACAGCA ATGGCGGCGA CGACATGAGC TTCAACATCT ACACCAGCGC GAGTTATTCG
ACCGTCTGGG GTAACGGCAC GACGGGCGGC CTTGTGGGCG GGAGCATTCC TGTTGGCGAC
AGCAACCAGT CGCAACCCGT GTACGGCAGG ATTGCGGCGA GCCAGAACAC GCTCAGGGCC
GGCAGCTATT CAGGCTCGCT GACCATGACG CTGACCTACA ACCCCTAG
 
Protein sequence
MRHPSSRPPA RKIPVLPSAL FLLLATAGPA QAGSCTVGSS GLAFGAYQPL TFAGKLTSSA 
VTSNASISVV CTGIASGGAY SIALGPSTTG SGDRISTRYL GNSNGGDDMS FNIYTSASYS
TVWGNGTTGG LVGGSIPVGD SNQSQPVYGR IAASQNTLRA GSYSGSLTMT LTYNP