Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0138 |
Symbol | |
ID | 4687703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 149206 |
End bp | 150633 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639833131 |
Product | DNA repair protein RadA |
Protein accession | YP_980384 |
Protein GI | 121603055 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.822754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCGG GCTGCCCAAT GATGCGAAGC GGTCAATACA CTAGCCGCAT GGCCAAAGAA AAAACGATTT ACACCTGCAC CGAATGCGGC GGCACCAGCC CCCGGTGGCT GGGCAAATGC CCGCATTGCA CTGCCTGGAA CACACTGATC GAATCCAGCG CCGAAAACCC CGCCGCTGGA AAAAACCGCT ACAGCCCGCA GTTCCAGTCT CTGGCCAAGG CCTGCGAAGT CACCGCGCTG GCCGACATCG AGGCCACCGA CATGACGCGC ACCCCGACCG GCCACGAGGA ACTCGACCGG GTGCTGGGCG GCGGCATTGT CGAAGGCGGC GTGGTGCTGA TCGGCGGCGA CCCGGGCATC GGCAAATCGA CGCTGCTCTT GCAGGCGCTC GACTCGCTGC AGCGCGCCGG GCTGAACACG CTGTATGTGA CCGGCGAGGA AAGCGGCGCG CAGGTCGCGC TGCGCTCGCG CCGGCTGGGG CTGGACGGTT CGCAGGTCAA GGTGATGGCC GAAATCCAGC TCGACAAGAT TCTCGCCACG CTGGAGGTCA CGCAGCCGGC GGTCGCCGTC ATCGACTCGA TCCAGACGGT GTATTCGGAC CAGCTGACCT CGGCGCCCGG CTCGGTGGCG CAGGTGCGCG AATGCGCGGC GCATTTGACG CGCGCGGCCA AGTCCAGCGG CGTGTGCATC GTGCTGGTCG GCCACGTCAC CAAGGACGGC GCGCTGGCCG GCCCGCGCGT GCTGGAACAC ATGGTCGATA CCGTGCTGTA TTTCGAGGGC GACACGCATT CGAGCTTTCG CCTCGTGCGC GCCATCAAGA ACCGCTTTGG CGCGGTCAAC GAAATCGGCG TCTTCGCCAT GACCGAAAAA GGCCTGAAGG GCGTGAGCAA CCCGAGCGCG ATGTTCCTGA GCCAGCACAG CGAGCCGGTG CCGGGCAGCT GCGTGATGGT CACGCTCGAA GGCACGCGGC CGCTGCTGGT CGAGATCCAG GCGCTGGTCG ATGACGGCGG CCCGAACCCG CGCCGCCTGA GCGTCGGCCT GGACCGCGAC CGGCTGGCGA TGCTGCTGGC CGTGCTGCAC CGCCATGCGG GCGTGGCCTG CATGGACCAG GACGTGTTCG TCAACGCCGT CGGCGGCGTG CGCATCAGCG AACCGGCGGC CGACCTGGCG GTGATGCTGG CGATTGCGTC GAGCCTGCGC GGCAAGGCCT TGCCCAAGGG CTTTCTGGCC TTTGGCGAGG TCGGCCTGGC CGGAGAAGTG CGGCCCGCGC CGCGCGGCCA GGAGCGGCTG AAGGAAGCGG CCAAGCTGGG TTTCAGCGTG GCGGTGGTGC CCAAGGCCAA CGCGCCGAAA AAGCCGATTG AAGGCCTGAC CATCCACGCC GTCGAGCGCA TCGAGCAGGC GCTGGACCTG GTGCGCAGCC TGCAGTAG
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Protein sequence | MQPGCPMMRS GQYTSRMAKE KTIYTCTECG GTSPRWLGKC PHCTAWNTLI ESSAENPAAG KNRYSPQFQS LAKACEVTAL ADIEATDMTR TPTGHEELDR VLGGGIVEGG VVLIGGDPGI GKSTLLLQAL DSLQRAGLNT LYVTGEESGA QVALRSRRLG LDGSQVKVMA EIQLDKILAT LEVTQPAVAV IDSIQTVYSD QLTSAPGSVA QVRECAAHLT RAAKSSGVCI VLVGHVTKDG ALAGPRVLEH MVDTVLYFEG DTHSSFRLVR AIKNRFGAVN EIGVFAMTEK GLKGVSNPSA MFLSQHSEPV PGSCVMVTLE GTRPLLVEIQ ALVDDGGPNP RRLSVGLDRD RLAMLLAVLH RHAGVACMDQ DVFVNAVGGV RISEPAADLA VMLAIASSLR GKALPKGFLA FGEVGLAGEV RPAPRGQERL KEAAKLGFSV AVVPKANAPK KPIEGLTIHA VERIEQALDL VRSLQ
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