Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0121 |
Symbol | |
ID | 4686665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 132847 |
End bp | 134412 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639833114 |
Product | ammonium transporter |
Protein accession | YP_980367 |
Protein GI | 121603038 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0596893 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC TGATTGCTTC CCTGCTGCTG GGACTGAGCT TGCTCGGCAC GGGCGCGACC GCCTGGGCGC AGGCCCCGGC CGAAGCGCCC GCCGCAACCG CCTCGGCGCC CGCTGAAGCC AAGCCTGACG CTGCCGCCGC CCCGGCTTCC GCGCCTGCCG ACACGGCTGC ACCCGCTGCC GCCGCGCCAG CCCCGGCCGC CGAAGCTTCC GCCGCCGCCG CGCCAGCGCC CGTCCCCAAC AAGGGCGACA CGGCCTGGAT GATGGTCTCG ACCATCCTGG TGATCCTGAT GGTCGTGCCC GGCCTGGCCC TGTTCTACGG CGGCCTGGTG CGCAGCAAGA ACATGCTGTC GGTGCTGATG CAGGTCATGG TGACGTTCTC GCTGATCGTC GTGCTGTGGT TCATCTACGG CTACAGCCTG GCCTTCACCG AGGGCAATGC CTTCATCGGC GGCTTTGACC GGCTGTTCAT GAAAGGCATC TGGGACAACG CCGCAGGCAC CTTTGCGAAT GCCGCGACTT TCAGCAAGGG CGTCGTGATT CCCGAGATCG TGTTTGCCGC CTTCCAGGCC ACCTTTGCCG GCATCACCTG CACCCTGATC GTCGGTGCTT TCGCCGAACG CATCAAGTTC TCCGCCGTGC TTGCGTTCAT GGTCATCTGG TTCACCTTCA GCTACGCCCC GATGGCGCAC ATGGTCTGGT TCTGGATGGG TCCCGATGCC TATACAGGCA AGGAAGTGGT TGACGCCATG ACCGGCAAGG CCGGCTACAT CTGGCAAACC GGCGCGCTGG ACTTCGCCGG CGGCACCGTG GTTCACATCA ATGCAGCCGT GGCCGGCCTG GTCGGCGCCT TCATGGTCGG CAAGCGCATC GGTTACGGCA AGGAAGCCAT GGCGCCTCAC AGCCTGACGC TGACCATGGT GGGCGCTTCG CTGCTGTGGG TGGGCTGGTT TGGTTTCAAC GCCGGCTCGG CACTCGAAGC CAACGGTTTT GCCGCACTGG CTTTCATCAA CACCCTGGGT GCAACGGCTG CGGCCGTGCT GGCCTGGTGC GTCGGTGAAG CATTGCTCAA GGGCAAGGCC TCGATGCTGG GCGCCGCTTC GGGCGCTGTC GCTGGCCTGG TGGCCATCAC GCCGGCCGCC GGCAACGTCG GCATCGCCGG TGGCCTGGCG ATTGGTTTCA TCGCCGGCTT TGCCTGCCTC TGGGGCGTGC ATGGCCTGAA GAAGATCCTG GGCGCCGACG ACTCGCTCGA CGTGTTCGGC GTGCATGGCG TGGGCGGTAT CGTCGGCGCC TTGCTGACCG GCGTGTTCAA CTCGCCCGCC CTGGGCGGTC CTGGCTACGT GGCTGACTGG GTGACCGCAG CCATGGTCAC CACGGCCGAC TATTCCATCA TGTCGCAAGT CTGGATTCAG GCCAAGGCCG TCTTGATCAC CATCGTGTGG TCGGGCGTGG TGTCGCTGGT GGCCTACAAG ATTGTTGACC TGACCATCGG CCTGCGCGTC AGCGAAGAAG ACGAGCGCGA AGGTCTGGAC ATCACCGCGC ATGGTGAAAC GGCCTACAAC CGTTGA
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Protein sequence | MKKLIASLLL GLSLLGTGAT AWAQAPAEAP AATASAPAEA KPDAAAAPAS APADTAAPAA AAPAPAAEAS AAAAPAPVPN KGDTAWMMVS TILVILMVVP GLALFYGGLV RSKNMLSVLM QVMVTFSLIV VLWFIYGYSL AFTEGNAFIG GFDRLFMKGI WDNAAGTFAN AATFSKGVVI PEIVFAAFQA TFAGITCTLI VGAFAERIKF SAVLAFMVIW FTFSYAPMAH MVWFWMGPDA YTGKEVVDAM TGKAGYIWQT GALDFAGGTV VHINAAVAGL VGAFMVGKRI GYGKEAMAPH SLTLTMVGAS LLWVGWFGFN AGSALEANGF AALAFINTLG ATAAAVLAWC VGEALLKGKA SMLGAASGAV AGLVAITPAA GNVGIAGGLA IGFIAGFACL WGVHGLKKIL GADDSLDVFG VHGVGGIVGA LLTGVFNSPA LGGPGYVADW VTAAMVTTAD YSIMSQVWIQ AKAVLITIVW SGVVSLVAYK IVDLTIGLRV SEEDEREGLD ITAHGETAYN R
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