| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0080 |
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| Symbol | |
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| ID | 4688681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 83455 |
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| End bp | 84699 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639833074 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_980327 |
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| Protein GI | 121602998 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.95759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCTC TTTTCAAATG GGGCGTTGGC GCCTTGCTGG TGTTGGCCGT GGCGGGCGCT
GCCGTGCTGG CCAGCCGGCG CGGCACGCCG GTGCAACTGG TGCCGGTGGC CCGCACCGGC
ATCGTGCAGT CGGTCGTCGC GACCGGGCGG CTCAACGCCC CGGCACGCAT GGACATTGGC
GCCGAAGTCA CCGCCACGGT GCTCGAAGTG CGCGTGCGCG AAGGCGACCG CGTCAGGGCC
GGCGCGCTGC TGCTGCGCCT GTCGGATGCC GAAGCGCGCG CCGCCTTGCA GCAGGCCAGC
GCCGCGCTGG TCGAAGCGCG CGGCCGCGCC ACCCAGCAGG CGACGGTGGC CGCGCCGGTC
GCTGGTCAAG CCGTGGTGCA GGCCGAAGCC GCGTTCACGT CGGCCGAGCG CGACTTCCAG
CGCGCCCGCG AACTGGTGGC GCAGGGCTTC TTTTCGCAGC AAAAGCTCGA CGACGCCCGG
CGCGCGCTCG ACACGGCCCG AAGCGCGCTG CAGTCGGCCC GGGTGCAGGC CCAGGCCAAC
CAGCCCAGCG GCGTCGAGCG CACGCTGGCC GCCTCGCGCG TCGATCAGGC CCTGGCTGCC
GTTGACATTG CGCAGGCGCG GCTGGCGCGC CTTAGCATCG CCAGCCCGGT CGATGCCATC
GTGCTGACGC GCAGCGTCGA GCCCGGCTCC ATGGCCCAGC CCGGCCATGT GCTGCTGACG
CTGGCCGCGC AGGGCGGCAC CCGCATCGAC GCCAATGTCG ATGAAAAAAA CCTGCGCCTG
CTGACCCCCG GCATGCCCGC CAAGGCGGTC GCCGACGCCT ACCCCGGCCA GTCCTTCGAT
GCGCAACTGA ACTACATCGC CCCGGCGGTC GATCCGCAGC GCGGCACGGT CGAGGTGCGG
CTGGCGGTGC CCAATCCTCC GCCCTTTTTG CGGCCCGACA TGACGGTGTC GGTCGAGCTG
GTCGGTGGCC TGAAAAAGGA CGCGCTGGTG CTGCCCTCGG GCGCGGTGCG CGACGCCGAC
CGCGAAGCGC CGTGGGTGCT GGCGCTGCAG GATGGACTGG CGGTGCGCGT GCCGGTCAAA
TTGGGCCTGC GCGGCGTCGG TTCCATTGAA ATCACCGAAG GGCTGAAAGA GGGCGACGCC
ATCATTCCAC AGACCGAAAA AGCCATCGCC GGCGACCGCG TGCGGCCCGG CCCGGTGGTG
GCGCCAGTCA AGGGCATGGA AACGCCGTCC TTCATTTCAC GCTGA
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| Protein sequence | MKPLFKWGVG ALLVLAVAGA AVLASRRGTP VQLVPVARTG IVQSVVATGR LNAPARMDIG
AEVTATVLEV RVREGDRVRA GALLLRLSDA EARAALQQAS AALVEARGRA TQQATVAAPV
AGQAVVQAEA AFTSAERDFQ RARELVAQGF FSQQKLDDAR RALDTARSAL QSARVQAQAN
QPSGVERTLA ASRVDQALAA VDIAQARLAR LSIASPVDAI VLTRSVEPGS MAQPGHVLLT
LAAQGGTRID ANVDEKNLRL LTPGMPAKAV ADAYPGQSFD AQLNYIAPAV DPQRGTVEVR
LAVPNPPPFL RPDMTVSVEL VGGLKKDALV LPSGAVRDAD REAPWVLALQ DGLAVRVPVK
LGLRGVGSIE ITEGLKEGDA IIPQTEKAIA GDRVRPGPVV APVKGMETPS FISR
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