Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0069 |
Symbol | |
ID | 4688054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 71660 |
End bp | 73081 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639833063 |
Product | FAD linked oxidase domain-containing protein |
Protein accession | YP_980316 |
Protein GI | 121602987 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.881498 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCAC CGCTGCCCAA GCACCTGCTC CCCGGAATCC TCCAGCGCGA AACGCCGCAG GCGCTGATAG CCGCGCTGAA AAACCGCTTT GCCGAGCGCT GCTCGACCGC CCTGGTGGTG CGCGAACAGC ATGGCCGCGA CGAGTCCTCG TTTGCCGCGC CGCCGCCGGC CGCCGTGGTG TTTGCCGAAA GCACGCAGGA CGTGGCCGAC GCGGTCAGGC TGGCCGGCCA GTACAGCGTG CCGGTGATTC CGTTTGGCGT CGGCACCTCG CTCGAAGGCC ACCTGCTGGC CGTGCAGGGT GGCATCAGCA TCGACGTGAG CCGCATGAAC CGGGTGCTGG CGATCAACCC GGAAGACCTG ACGGTGACGG TGCAGCCCGG CGTGACGCGC AGGCAGCTCA ATGAAGAAAT CAAGAGCACC GGCCTGTTCT TTCCCATCGA CCCCGGCGCC GACGCCACGC TGGGCGGCAT GAGCGCCACC CGCGCCAGCG GCACCAATGC CGTGCGCTAC GGCACCATGC GCGAGAACGT GCTGGCGCTT GAAGTCGTCA CCGCCAGCGG CGAGATCATC CGCACCGGCA CGCGCGCCAA GAAGTCAGCC GCCGGCTACG ATTTGACGCG CCTGATGGTC GGCAGCGAAG GCACGCTGGG CGTGATCACC GAGGTCACGG TCAAGCTCTA CCCGCTGCCC GAGGCAATTT CGGCGGCGGT CTGCTCGTTC CCGAGCATCG AGGCGGCGGT GCGCACGACC ATCGAGATCA TCCAGTTGGG CGTGCCGATT GCGCGCGTCG AGCTGATCGA CGCCCACACC GTGCGCATGG TCAACGCCCA CAGCCGGCTT GCCCTGCGCG AGGAGCCGAT GCTGCTGATG GAGTTCCACG GCACGCCGAA CGGCGTGAAG GAGCAGGCCG AGCTGGTGCA GGAACTGGCC AGCGGCCACG GCGGCAATGC CTTTGAATGG GCCAGCACGC CCGAGGAGCG CACGCGGCTG TGGACGGCGC GCCACAACGC CTACTTTGCG GCCATCCAGA GCAAGCCCGG CTGCCGGGCG ATTTCGACCG ACACCTGCGT GCCGATTTCC CGCCTGGCCG ACTGCCTGCT CGAATCGGTG GCCGAGGCCG AAGCCAGCGG CATTCCCTAT TTCCTGGTCG GCCATGTCGG CGACGGCAAT TTTCACTTCG GCTACCTGAT CGACCCCGAC AACGCCCAGG AGCGCGATGC CGCCGAAGCG CTGAACCACC AGCTCGTGGC CAGAGCCCTG AGCCTGGAAG GCACCTGCAC CGGCGAGCAC GGCATCGGCC TGGGCAAGAT GGACTTCCTG CTGAGCGAGA CCGGCGGCGG CGCGGTGGAC ATGATGCGCG CCATCAAGCG CGCGCTCGAC CCGCAGAACA TCATGAATCC GGGGAAGATT TTTACCCTCT GA
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Protein sequence | MNAPLPKHLL PGILQRETPQ ALIAALKNRF AERCSTALVV REQHGRDESS FAAPPPAAVV FAESTQDVAD AVRLAGQYSV PVIPFGVGTS LEGHLLAVQG GISIDVSRMN RVLAINPEDL TVTVQPGVTR RQLNEEIKST GLFFPIDPGA DATLGGMSAT RASGTNAVRY GTMRENVLAL EVVTASGEII RTGTRAKKSA AGYDLTRLMV GSEGTLGVIT EVTVKLYPLP EAISAAVCSF PSIEAAVRTT IEIIQLGVPI ARVELIDAHT VRMVNAHSRL ALREEPMLLM EFHGTPNGVK EQAELVQELA SGHGGNAFEW ASTPEERTRL WTARHNAYFA AIQSKPGCRA ISTDTCVPIS RLADCLLESV AEAEASGIPY FLVGHVGDGN FHFGYLIDPD NAQERDAAEA LNHQLVARAL SLEGTCTGEH GIGLGKMDFL LSETGGGAVD MMRAIKRALD PQNIMNPGKI FTL
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