Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0060 |
Symbol | |
ID | 4689872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 63703 |
End bp | 64887 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639833054 |
Product | beta-ketothiolase |
Protein accession | YP_980307 |
Protein GI | 121602978 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.629911 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGTG AAGTAGTAGT TGTCAGCGGT GTGCGCACCG CCATTGGAAC CTTTGGCGGC AGCCTGAAAG ACACGCCGCC CACCGAGCTG GCCGCGCTGG TCGTTCGTGA ATCGCTCGCG CGCGCCGGCG TCGAGGGCAA GGATGTCGGC CATGTGGTGT TCGGCCATGT CGTCAACACC GAAGCCAAGG ACATGTACCT GTCGCGCGTG GCAGCCGTCA ACGGCGGCTG CGCCGAAGGC ACGCCCGCGT TCAACGTCAA CCGCCTGTGC GGCTCGGGCC TGCAGGCCAT CATCTCGGCC AGCCAGAGCA TTTTGCTCGG CGACGCGGAC ATCGCCATTG GCGGCGGCGC CGAAAACATG AGCCGCGGCC CCTACGCCAG CCTGGCCACG CGCTTTGGCG CGCGCCTGGG CGACAGCAAG CTGGTCGACA TGGTGGTCGG TGCGCTGCAT GACCCGTTCC ACACCATCCA CATGGGCGTG ACGGCCGAGA ACATCGCCGC CAAGTGGGGC ATCACGCGCG AGGAGCAGGA CGCGCTGGCC GTGCAGAGCC ACAACCGCGC CCAGAAGGCG ATTGAAGCAG GCTACTTCAA GGAGCAGATC GTGCCGGTGA TGCTCAAGAG CCGCAAGGGC GAAGTGGCGT ATGACACCGA CGAGCATTTC CGCCCGAACT GCACGCTGGC CGACATGGCC AAGCTGAAAC CCGTGTTCGT CAAGGAAAAC GGCACGGTGA CGGCTGGCAA CGCCTCGGGC ATCAACGACG CGGCCGCTGC CGTGGTCTTG ATGGAAGCCG GCGTTGCCGA GGCGCGCGGC CTCAAGCCCC TGGCCCGTCT GGTCGCCTAC GCGCATGCCG GCGTCGATCC GAAATACATG GGCATCGGCC CGGTCCCGGC CACCCAGATG GCGCTGAAAA AAGCCGGCCT CACGGTCAAT GACCTGGACG TGATCGAGGC CAACGAGGCG TTCGCCGCCC AGGCCTGCGC CGTCACGCGC GACCTGGGGC TCGACCCGGC CAAGGTCAAT CCGAACGGCT CGGGCATCTC GCTGGGCCAC CCGATTGGCG CGACCGGCGC CCTGATCACC GTCAAGGCGC TGCACGAGCT CAAGCGCATC CAGGGCCGCT ACGCGCTGGT GACGATGTGC ATCGGCGGCG GCCAGGGCAT CGCGGCGATT TTCGAGCGGA TGTAA
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Protein sequence | MTREVVVVSG VRTAIGTFGG SLKDTPPTEL AALVVRESLA RAGVEGKDVG HVVFGHVVNT EAKDMYLSRV AAVNGGCAEG TPAFNVNRLC GSGLQAIISA SQSILLGDAD IAIGGGAENM SRGPYASLAT RFGARLGDSK LVDMVVGALH DPFHTIHMGV TAENIAAKWG ITREEQDALA VQSHNRAQKA IEAGYFKEQI VPVMLKSRKG EVAYDTDEHF RPNCTLADMA KLKPVFVKEN GTVTAGNASG INDAAAAVVL MEAGVAEARG LKPLARLVAY AHAGVDPKYM GIGPVPATQM ALKKAGLTVN DLDVIEANEA FAAQACAVTR DLGLDPAKVN PNGSGISLGH PIGATGALIT VKALHELKRI QGRYALVTMC IGGGQGIAAI FERM
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