| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0056 |
|---|
| Symbol | |
|---|
| ID | 4689787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 56052 |
|---|
| End bp | 58742 |
|---|
| Gene Length | 2691 bp |
|---|
| Protein Length | 896 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639833050 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_980303 |
|---|
| Protein GI | 121602974 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1042] Acyl-CoA synthetase (NDP forming) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.145927 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAAC ACTACCTCAC CCCGCTTTTC TCCCCCCAAT CCATCGTCGT CTTCGCCGGC
CAGGCCGACG ACCCGGACCG CCTGACATCG CGCGCCCGGG TGCTGCACCA GGCGCTGCGC
GCCCAGAAGT ACACCGGCAC GCTGCAGTTC CTGGACATCC ACACCACCGG CACGCTGGCC
GACCTGGCGC AGACCGGTGC CGACCTGGCC ATCATCGCGC TGCCGCCGCA GGAAGTGGCC
GCCGCGCTGG AGATTGCCGG GCGCCTGACC TGCCGCTCGG CGCTGGTGAT CACCAGCGGC
ATCAACGCCG ACGGCGCTGC CGAACTCAAG CGGATTGCGC GCCGCGAAGG CATCTTCCTG
CTCGGCCCGA ATGGCCTGGG CCTGCAGCGC CCGCACCTGC AGCTCAATGC GAGCGCCGCC
GGGCCGATGG CCAAGCCGGG TTCGCTGGCG CTGGTGTCGC AGTCCGGCGC GCTGACCGCG
TCCATCCTCG ACTGGGCCAG CAAGAACGGC GTCGGTTTTT CATCGGTGGT CTCGCTGGGC
CCCAACACCT CGGTCGATAT TGCGCAGGTG CTCGATTTCC TGGCCAACGA CCGCCAGACC
CAGAGCATCG TCATCTACCT CGAAGGCATC TCCAGCGCCC GCCGCTTCAT GAGCGCGCTG
CGCTCGGCGG CCAACGCCAA GCCGGTGGTC GTGCTCAAGG CGGGCCGGCG GCCGGCCGGC
AACGAAGCGG CGCAAACCCA CAGCGGCGCC ATCGTCGGCA GCGACGATGT GTTCGATGCC
GCCCTGCGCC GCGCCGGCGC GGTGCGCGTG CGCTCGTTTG TCGAGCTTTT TTCGGCCGCC
AAATGCCTGG CCTCGCGCTA CCGCCCGGTC GGCAACCGGC TGGCCATCGT CACCAACGGC
GGCGGGCCGG GCGTGCTGGC GGCCGACTGG GTGAATGAAA TCCACCTGCA ACTGGGCAAA
CTGTCGCCCG AATCGTCCAG CGCCCTCAAG CCGCTGCTGC CCGAGCTGGC GTCGCTGTGC
GACCTGATCG ACCTGTCCGA AGAAGCCACG CCCGCACACT ACAAGGCCGC CATCGAGGCG
GCGGGCAATG ACCGGCAGAT CGACGGCGTG CTGGCGATTT TCTCGCCCAA GGAAGGGGTC
GATGCCTCCG AAGTGGCGCG CGCGCTGGCC GATGTCAAGC GCAGCATGGG CAAGCCGCTG
CTGTCGTGCT GGATGGGCGA TGCCTCGGTC GTGATAGGGC GCGAGATCTT GAACGAAGCG
GCGATTCCGA CCTTTCGCAC GCCCGAGGCG GCCGTCGGCG CCTTTGGCAA CATCGCCTCG
TTCTACCAGA ACCAGCAGCT GCTCCAGCAA ACGCCGCCGC CGCTCTCGAC ACTGGCCAAG
CCCGACATCG AGGGCGCGCG GCTGATCATC GAGCATGTGC TGGCCGAGCG CCGCAAGGTG
CTGACCGAGA TGGAGTCCAA GACGCTGCTG TCGGCATTCC ACATCCCGGT CACGCAAACG
ATTTTGGCGC GCAGCGCCAC CGAGGCGATG ATGATCGCCA CGCAGCTGGG CTTTCCGGTG
GCGCTGAAGA TCGACTCGCC CGACATCAGC CACAAGTCGG ACGTCGAAGG CGTGGCGCTG
AACATCCTGA ACGCCACCGG CGTGCGCGAC ACCTTTACCG AGATGATGCA GACCGTTTCG
CGCCTGAAAC CCAATGCGCG CATCAACGGC GTGACGGTGC AGACCATGGC GCGCGCCAAG
CGCGGCCGCG AGGTGTGCGT CGGCCTGGTC ACCGACGACC CGTTCGGCCC GGTGATCGCC
TTTGGCGCGG GCGGCACCAT GATCGAGCTG ATCGACGACC GGGCGATGGA GCTGCCGCCG
CTGAACCAGT TCCTGGCGCG CCACCTGATT TCGCGCTCGC GCGTGGCCGA AACCCTGGGC
GCCTGGCGCG GCGCCAGTCC GGCCGACATG AATGCGCTGG AGCAGATCCT GCTGCGCGTC
TCGGAAATGG TCTGCGAGCT GCCCCAGTTG CGCGAGATGG ACATCAACCC GATCATCGTC
GATGAGTCCG GCGCGGTGGC CGTCGATGCG CGCATCGTGA TCGACAACGC GCCGCAGGCC
ATCAACGGCC GGGCCAATCC CTACAACCAC CTGTCCATCC TGCCCTACCC GGCGCGCTAC
GAGCAGGTCT GGCCCTTGCG CGGCGGCGGC GAATACATCG TGCGCCCGAT CCACCCGGAC
GACGCGCAGA TGCTGCAGGA AATGATGTCG CACCTGTCGC AGGAAAGCCG CTATTTCCGT
TTCATCTCGT CCATCGTCGA GCTGCCGCCC AGCATGCTGG CGCGCTTCAC GCTGATCGAC
TACGACCGCG AGATGGCGCT GGTCGCCGTG TTCAAGGAGC GCCGTCCCGG CGCCAACGGC
GAGGCTCTGG AAACCGAGCG CATCGTGGGC GTTTCACGCT ACGTCACCAA CCCCGACCAG
TCGAGCTGCG AGTTCGCCCT GGTGGTGGCC GACGACTTCA GCGGCAAGGG CCTGGGTTCG
CGCCTGATGC TCAGCATCAT GGACGTGGCG CGCGAAAAGG GACTGTCCGA GATCGAGGGC
CTGGTGCTGG CGCAAAACCC CGGCATGCTC AAGCTCATGA AGGGCTTGGG CTACACCATC
AAGCCGTTTG CCGAGGACCC GGATTTCAAG CTGGTCACGC ATACGCTGTG A
|
|---|
| Protein sequence | MDKHYLTPLF SPQSIVVFAG QADDPDRLTS RARVLHQALR AQKYTGTLQF LDIHTTGTLA
DLAQTGADLA IIALPPQEVA AALEIAGRLT CRSALVITSG INADGAAELK RIARREGIFL
LGPNGLGLQR PHLQLNASAA GPMAKPGSLA LVSQSGALTA SILDWASKNG VGFSSVVSLG
PNTSVDIAQV LDFLANDRQT QSIVIYLEGI SSARRFMSAL RSAANAKPVV VLKAGRRPAG
NEAAQTHSGA IVGSDDVFDA ALRRAGAVRV RSFVELFSAA KCLASRYRPV GNRLAIVTNG
GGPGVLAADW VNEIHLQLGK LSPESSSALK PLLPELASLC DLIDLSEEAT PAHYKAAIEA
AGNDRQIDGV LAIFSPKEGV DASEVARALA DVKRSMGKPL LSCWMGDASV VIGREILNEA
AIPTFRTPEA AVGAFGNIAS FYQNQQLLQQ TPPPLSTLAK PDIEGARLII EHVLAERRKV
LTEMESKTLL SAFHIPVTQT ILARSATEAM MIATQLGFPV ALKIDSPDIS HKSDVEGVAL
NILNATGVRD TFTEMMQTVS RLKPNARING VTVQTMARAK RGREVCVGLV TDDPFGPVIA
FGAGGTMIEL IDDRAMELPP LNQFLARHLI SRSRVAETLG AWRGASPADM NALEQILLRV
SEMVCELPQL REMDINPIIV DESGAVAVDA RIVIDNAPQA INGRANPYNH LSILPYPARY
EQVWPLRGGG EYIVRPIHPD DAQMLQEMMS HLSQESRYFR FISSIVELPP SMLARFTLID
YDREMALVAV FKERRPGANG EALETERIVG VSRYVTNPDQ SSCEFALVVA DDFSGKGLGS
RLMLSIMDVA REKGLSEIEG LVLAQNPGML KLMKGLGYTI KPFAEDPDFK LVTHTL
|
|---|
| |