| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0036 |
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| Symbol | |
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| ID | 4689990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 34934 |
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| End bp | 38545 |
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| Gene Length | 3612 bp |
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| Protein Length | 1203 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639833030 |
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| Product | biotin carboxylation domain-containing protein |
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| Protein accession | YP_980283 |
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| Protein GI | 121602954 |
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| COG category | [E] Amino acid transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1984] Allophanate hydrolase subunit 2
[COG2049] Allophanate hydrolase subunit 1
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain
[TIGR02712] urea carboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.879734 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGATA CCGTTTTGAT CGCCAATCGC GGCGCCATCG CCTGCCGCGT CATCCGCAGC
CTGAAGGCCC TGGGCCTGCG CTCGGTGGCC GTGTATTCCG AGGCCGACGC CGATTCGCTG
CATGTCGCCA TGGCCGACGC CAGCGTCTGC ATCGGCCCGG CGCCGGCCGC GCAGAGCTAC
CTGGACCCGC AGCGCATTCT GGACGCGGCG CGCGCCACCG GCGCCGGCGC CATCCACCCC
GGCTACGGCT TTTTGTCCGA GAACCCGGAC TTCGCCCAGG CCTGCGAGGA TGCCGGCATC
GCCTTCATCG GCCCCACGCC CGCGCAGATG CGCGCCTTCG GCCTCAAGCA CACGGCGCGC
GCGCTGGCCG AAGCCCAGGG CGTTCCCCTG CTGCCCGGCA GCGGCTTGCT GTCTGACCTG
GCGCAGGCGC GCAGCGAGGC CGCGCGCATC GGCTACCCGG TCATGCTCAA AAGCACGGCG
GGCGGCGGCG GCATCGGCAT GCGCCTGATC CGCAATGACG CCGAGATGGC CCCCGCGTTC
GAGGCCGTGC AGCGCCTGGC GCAGGCCAAC TTCAAGGACG CTGGCCTGTT CCTGGAAAAA
TTCGTCGAGC GCGCCCGCCA CATCGAGGTG CAGCTGTTTG GCGACGGCCG GGGCCAGGTG
GTGTCGCTGG GCGAGCGCGA TTGTTCGGCC CAGCGCCGCA ACCAGAAAGT GATCGAGGAA
ACCCCCGCGC CCGGCCTCGA TGAGGCCACC CGCGCCGCCC TGCAGCAAAC CGCTGTGCGC
CTGGCCGAGG CGGTCCATTA CCGCTCGGCC GGCACGGTCG AATACGTGCT GGACGCCGAC
ACCGGCGCGT TTTACTTCCT TGAAGTCAAC ACCCGCCTGC AGGTCGAGCA CGGCGTGACC
GAACAGGTGA CCGGCGTGGA TCTGGTGGCC TGGATGCTGC GGCTGGCGCG CGGCGACGAC
TTCGCGCTGC AGGTGCCCGC GCCCCGGGGC GCATCGATCC AGGTGCGGCT GTACGCCGAA
GACCCGGCAC GCAACTTTCA GCCCTGCGCC GGGGGCTTGA CCGAAGTCGT CTTTCCGGCC
GACGCGCGCA TCGAAACCTG GGTGGCGACC GGCAGCGAAG TGCCGCCGCA CTACGACCCG
ATGATCGCCA AGCTGATCGT CACCGGCAGC GACCGCGCCG ACGCGGTGGC GAAGCTGCAG
GCCGCGCTGG CGGCCACCCG CCTGGGCGGC ATTGAAACCA ATCTGCGTTA CCTGCGCAGC
GTGGCGGCCG GCCCGGTGTT CGTGCAGGGC CGCATGGTCA CGCGCAGCCT GGCCGATCTG
CACTACCAGC CGCAGGCGCT GGAGGTGCTG GAGCCGGGCG TGCAGACCAG CGTGCAGGAC
CACCCCGGCC GCGTCGGCTA CTGGGCGGTG GGCGTGCCGC CGTCGGGGCC GATGGACGAC
CTGGCGATGC GCCTGGCAAA CCGCCTGGTC GGCAACGCGG AGCATGCCGC CGCGCTGGAA
TGCACGCTCA GCGGCCCCAG CCTGCGCTTT CACCACGACA CCGTGATCGC CGTGTGCGGC
GCGGCCATGG CGGTCAGCGT GGACGGCGTG GCGCTGGCGC CGTGGCAATC GCACACGGTG
AAAGCGGGCA GCGTGCTGAA GCTGGGCGCG GTGCAGGGCT TTGGCGCGCG CACCTACCTG
GCGCTGCGCG GCGGGCTGGA CGTGCCGCTC TACCTGGGCA GCCGCTCGAC CTTCACGCTG
GGCCAGTTCG GCGGCCACGC GGGCCGCACC TTGCGCACTG GCGACATGCT GCACATCGGC
ACCGATGCCG TCGCCGAGCC TCTGGCCGCC TTGCCGCTGG ACGTGGTGCC GGTGTACCAG
AACCACTGGG ACATCGCCGT GCTCTACGGC CCGCACGGCG CGCCGGATTT CTTCACCGAT
GACGATGTGC GGATGTTCTT TGGCACCGAC TGGCAGGTGC ACTACAACTC CAGCCGCACC
GGCGTTCGCC TGATCGGCCC CAAGCCCGAA TGGGCGCGGC GCGACGGCGG CGAGGCAGGC
CTGCACCCGT CCAACATCCA CGACAACGCC TATGCGATTG GCGCCATCGA CTTCACCGGC
GACATGCCCG TCATCCTCGG GCCCGACGGC CCCAGCCTGG GCGGCTTTGT CTGCCCGGCC
GTGGTGCTGG CCAGCGAGCG CTGGAAAATG GGCCAGCTGC GCCCCGGCGA CGGCGTTCGC
TTTCGCTGCG TCACCGCCGA CGAGGCCCTG GCCCTGCACG CCGCGCAGGA AAGCCGCATT
GCCGGTCTGG CGTGGAGCCC ACCGGATGTG CCGCAGCGCA CCGAAGCCGT GGGTTCGCCC
ATCCTTGCGC AGCGAGAAGC ACAAGGCGAG CGCCCGGCCC TGGTGCTGCG CCAGGCCGGC
GACCGCTATG TGCTGGTGGA ACTGGGCGAC GCGGTGCTGG ACATCGCGCT GCGCCTGCGC
GTGCATGGCC TGATGCAGTC GCTGCAAGCG CAACAGCTGC CCGGCATCGT CGACCTGACG
CCCGGCATCC GCTCGCTTCA GATACATTTT GAGCCGCTGG CGCTTACTGT GCCTGCGTTG
ATAGCTGCGA TTTTCATAGC AGACGATGCG CTCGGCGATA CCGATGACCT GGTCGTGCCG
TCGCGCACCG TGTACCTGCC GCTGTCGTGG GACGACAGCG CGACCCGGCT GGCGATTGAA
AAATACATGC AGTCGGTGCG CCCGGACGCG CCCTGGTGCC CGAGCAACAT CGAGTTCATC
CGCCGCATCA ACGGCCTGCA GAGTATTGAA GAAGTGCAGC GCACCGTGTT CGACGCCAGC
TACCTGGTGC TGGGCCTGGG CGACGTGTAC CTGGGCGCGC CCGTGGCCAC GCCGCTGGAC
CCGCGCCACC GCCTGGTGAC GACCAAGTAC AACCCGGCCC GCACCTGGAC GCCCGAGAAC
GCCGTGGGCA TTGGCGGCGC CTACATGTGC GTCTATGGCA TGGAAGGCCC CGGCGGCTAC
CAGTTCGTCG GCCGCACGCT GCAGATGTGG AACCGCTGGC GCGATGCTTC CAGCGGCGCC
CCAGCCTTCG AGCCCGGCAA GCCGTGGCTG CTGCGCTTTT TCGACCAGAT CCGCTTCTAC
CCGGTGGGCG AGGAGGAACT GCTGCGGATC CGCCGCGATT TTCCCGCCGG GCGCTACCCG
CTGCGCGTGG AGGACGGCAC GTTCAGCCTG CACGACTACC GCGCGTTCCT GAAGGAGAAC
GCCAGCGGCA TCGCCGCCTT CCGCGCCCTG CAAGGCCAGG CGTTTGAGGA GGAGCGCGAG
CGCTGGCGCG TGGCCGGCCA GGCCGAGTAC GTGAGTGAGG CGGAGTTGCT GGACGCGGCC
GTGTCCGCCG ACGACCTGCC CCCTGGTGCC CGCAGCGTGG CGACCGCCGT GCCCGGCAGC
GTGTGGAAGC TGCTGGTGGC CGAGGGCGAC TCGGTGGACG AGGGCGATGC CCTGCTGGTG
ATCGAGTCCA TGAAGATGGA ATTCACCGTG TTCGCCCCCT GCGCGGGCCA GGTCTTGCGC
ATGGCTTGCC GCGAAGGCAG CGCCGTGGCG GCGGGACAAG ACGTTGTCGT GATTCAAGGA
GAAACCGCAT GA
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| Protein sequence | MFDTVLIANR GAIACRVIRS LKALGLRSVA VYSEADADSL HVAMADASVC IGPAPAAQSY
LDPQRILDAA RATGAGAIHP GYGFLSENPD FAQACEDAGI AFIGPTPAQM RAFGLKHTAR
ALAEAQGVPL LPGSGLLSDL AQARSEAARI GYPVMLKSTA GGGGIGMRLI RNDAEMAPAF
EAVQRLAQAN FKDAGLFLEK FVERARHIEV QLFGDGRGQV VSLGERDCSA QRRNQKVIEE
TPAPGLDEAT RAALQQTAVR LAEAVHYRSA GTVEYVLDAD TGAFYFLEVN TRLQVEHGVT
EQVTGVDLVA WMLRLARGDD FALQVPAPRG ASIQVRLYAE DPARNFQPCA GGLTEVVFPA
DARIETWVAT GSEVPPHYDP MIAKLIVTGS DRADAVAKLQ AALAATRLGG IETNLRYLRS
VAAGPVFVQG RMVTRSLADL HYQPQALEVL EPGVQTSVQD HPGRVGYWAV GVPPSGPMDD
LAMRLANRLV GNAEHAAALE CTLSGPSLRF HHDTVIAVCG AAMAVSVDGV ALAPWQSHTV
KAGSVLKLGA VQGFGARTYL ALRGGLDVPL YLGSRSTFTL GQFGGHAGRT LRTGDMLHIG
TDAVAEPLAA LPLDVVPVYQ NHWDIAVLYG PHGAPDFFTD DDVRMFFGTD WQVHYNSSRT
GVRLIGPKPE WARRDGGEAG LHPSNIHDNA YAIGAIDFTG DMPVILGPDG PSLGGFVCPA
VVLASERWKM GQLRPGDGVR FRCVTADEAL ALHAAQESRI AGLAWSPPDV PQRTEAVGSP
ILAQREAQGE RPALVLRQAG DRYVLVELGD AVLDIALRLR VHGLMQSLQA QQLPGIVDLT
PGIRSLQIHF EPLALTVPAL IAAIFIADDA LGDTDDLVVP SRTVYLPLSW DDSATRLAIE
KYMQSVRPDA PWCPSNIEFI RRINGLQSIE EVQRTVFDAS YLVLGLGDVY LGAPVATPLD
PRHRLVTTKY NPARTWTPEN AVGIGGAYMC VYGMEGPGGY QFVGRTLQMW NRWRDASSGA
PAFEPGKPWL LRFFDQIRFY PVGEEELLRI RRDFPAGRYP LRVEDGTFSL HDYRAFLKEN
ASGIAAFRAL QGQAFEEERE RWRVAGQAEY VSEAELLDAA VSADDLPPGA RSVATAVPGS
VWKLLVAEGD SVDEGDALLV IESMKMEFTV FAPCAGQVLR MACREGSAVA AGQDVVVIQG
ETA
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