Gene Pnap_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0024 
Symbol 
ID4687101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp21825 
End bp22331 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content54% 
IMG OID639833018 
Producthypothetical protein 
Protein accessionYP_980271 
Protein GI121602942 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.309029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.358699 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTCC AGCGACTTTC AGGCTTTTCC ACTCCACGGA ACCGGCATTT CACTTTGTGG 
GCATTGGCCT TGGGCTGTCT GTTGCTGTCC GGTTGCAGCG CAACGGGCGC CAAGTTTCAA
GGCTTGGAAA AACCAGATTC AGACGCTGGC GAAATCGTGG TCTATCGGCC AGATCGGTTG
GTTCGGGGTG GCGTGGCTTA CTACGTGCAT CTGGATGGGA AAGAGGTGGG CATGTTGAAA
AACGCCGGCT TTGTTGCATT GCGCACAACG CCCGGAACGC ATGTGGTTCT GATGAAGGCT
GGACTTCAGG ATTTTTTCAT GAAGGCAAGG ACTGCCGAAG TGGTGTTGCT TGCCGGGGAG
CGCAAGTTCC TTCGATTTGA ACCTTCCATC ACCGGTAGTC CCATCGTCCT GCCGAACGTG
GCCTATGTTC CAGTTGGCTT TGGCTTTATA GCTGTCCCGG AGGGCCAGGC AGCTATCGAG
TTACGAGATC TAAATCAGTC AAAGTGA
 
Protein sequence
MNLQRLSGFS TPRNRHFTLW ALALGCLLLS GCSATGAKFQ GLEKPDSDAG EIVVYRPDRL 
VRGGVAYYVH LDGKEVGMLK NAGFVALRTT PGTHVVLMKA GLQDFFMKAR TAEVVLLAGE
RKFLRFEPSI TGSPIVLPNV AYVPVGFGFI AVPEGQAAIE LRDLNQSK