Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0024 |
Symbol | |
ID | 4687101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 21825 |
End bp | 22331 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639833018 |
Product | hypothetical protein |
Protein accession | YP_980271 |
Protein GI | 121602942 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.309029 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.358699 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCTCC AGCGACTTTC AGGCTTTTCC ACTCCACGGA ACCGGCATTT CACTTTGTGG GCATTGGCCT TGGGCTGTCT GTTGCTGTCC GGTTGCAGCG CAACGGGCGC CAAGTTTCAA GGCTTGGAAA AACCAGATTC AGACGCTGGC GAAATCGTGG TCTATCGGCC AGATCGGTTG GTTCGGGGTG GCGTGGCTTA CTACGTGCAT CTGGATGGGA AAGAGGTGGG CATGTTGAAA AACGCCGGCT TTGTTGCATT GCGCACAACG CCCGGAACGC ATGTGGTTCT GATGAAGGCT GGACTTCAGG ATTTTTTCAT GAAGGCAAGG ACTGCCGAAG TGGTGTTGCT TGCCGGGGAG CGCAAGTTCC TTCGATTTGA ACCTTCCATC ACCGGTAGTC CCATCGTCCT GCCGAACGTG GCCTATGTTC CAGTTGGCTT TGGCTTTATA GCTGTCCCGG AGGGCCAGGC AGCTATCGAG TTACGAGATC TAAATCAGTC AAAGTGA
|
Protein sequence | MNLQRLSGFS TPRNRHFTLW ALALGCLLLS GCSATGAKFQ GLEKPDSDAG EIVVYRPDRL VRGGVAYYVH LDGKEVGMLK NAGFVALRTT PGTHVVLMKA GLQDFFMKAR TAEVVLLAGE RKFLRFEPSI TGSPIVLPNV AYVPVGFGFI AVPEGQAAIE LRDLNQSK
|
| |