Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0014 |
Symbol | |
ID | 4687089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 12012 |
End bp | 12845 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639833008 |
Product | endonuclease/exonuclease/phosphatase |
Protein accession | YP_980261 |
Protein GI | 121602932 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.241981 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCCT TCATTCCCAC CCCTGCTTCC CGTCCAGCGC ATCCCGAGGC CGCCCAGGCT GACCAGCCCG CGCCCGAGGT CCACACGCCT TATTCCTTCA AGGTGCTCAC GGTCAATATC CACAAGGGCT TCACCTTTTT CAACCGCAAG TTCATCCTGT CCGAATTGCG CGATGCGGTG CGCACCGTGG GCGCGGACGT GGTGTTTTTG CAGGAGGTGG CCGGCAGCCA TCTCAAGCAT GCCGAGAAGT TCGACAACTA CCCCGAAGAG CCGCATTACG AATACCTGGC CGACAGCATC TGGGAGCAGT TTGCCTACGG CCGCAACGCG GTCTATACCC ACGGCCACCA CGGCAACGCG GTGCTGTCGA AGTTTCCGAT TGTCCGGTTT GAAAACCGCG ACATCTCCAT CAGCGGCCCC GAGCGGCGCG GCATGCTGCA TTGCGAACTG CAGGTGCCCG GCCAGAGCCG CAATGTGCAC GCGATCTGCG TACACCTGGG GCTGGTCGAA AGCCACCGCA CGCAGCAGAT GAAGCTGGTG TGCGACCTGG TGCGCAAGGA AATTCCCGTG CGCGCCCCGG TGGTGGTGGC CGGCGACTTC AACGACTGGC GGCGCCGTGC CCATGCCCAG ATGGCCAAGG GCGCGAACCT GCACGAGGTG TTCGTGCAGG CCAACGGCCA GGCGGCGCGG ACCTTTCCGG CGCGCCTGCC GCTGCTGCAG CTGGACCGCA TCTATGTGCG CAATGCCATC GGCCATTCGC CCATCGTGCT GCCCAGCCAC CCGTGGTCGC ACCTGTCCGA CCATGCGCCG CTGGCGGCGG AAATCCGCCT GTAA
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Protein sequence | MQPFIPTPAS RPAHPEAAQA DQPAPEVHTP YSFKVLTVNI HKGFTFFNRK FILSELRDAV RTVGADVVFL QEVAGSHLKH AEKFDNYPEE PHYEYLADSI WEQFAYGRNA VYTHGHHGNA VLSKFPIVRF ENRDISISGP ERRGMLHCEL QVPGQSRNVH AICVHLGLVE SHRTQQMKLV CDLVRKEIPV RAPVVVAGDF NDWRRRAHAQ MAKGANLHEV FVQANGQAAR TFPARLPLLQ LDRIYVRNAI GHSPIVLPSH PWSHLSDHAP LAAEIRL
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