Gene Pnap_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0006 
Symbol 
ID4687081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp5834 
End bp6508 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content71% 
IMG OID639833000 
Producthypothetical protein 
Protein accessionYP_980253 
Protein GI121602924 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.382734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGGTT TCAACCATTC CCGCACCCTA TCGATCCCAA CCTCTTCCCT CCCTTCCCCG 
TGGAAGCAGC AGCGCTTCCT GCGGGCCATT CCTTCCCTGA TGGTGCTGAC CACGGCCATC
GCCTGGGGCA CTGCATCGCA TGCCGGCGGA CTGGCCCTTG ACGGCGCCCT GCGCAATGGC
GTGAATGTTG CCGCAGGCCC CGCTCTGGAT GCTGGCGTGA GTGCCGGCGT GGGCGTGGAC
GCCAGTGCCG GCGTGAAGGG CGCTGGCGGC ATGGCCGGAG TCGATGCCGC AGGCAGCGCC
GGTTCTGGCG CCAACCGCAA TATCACGGAT GAGCAGCGCA TGGCGGCCAT GGCTGCGGTG
GGTGGCGATG CGAATGCGCA GGGCGCCGCT GGCGTTGAGG CTCCAGGCGT GGGCCGCACG
GCAGGCGGCG TGCGTGGCAT GGGCGAATCC GTCGGCGGCG CTGCGGCGCG GACCGGCCAG
CGCGCGACCC AGGGCGTCAG GTCCGAGGTT TCGGGTGGCT TGAAGGGCGG CGCGAATGCC
GCCACCAACG CTGCCAGCGG CGCCAGGACC GGCATGCCGG GCATTGGCAA GGCCGGTGCC
GCAGGCGCCA GGCTCGGCGC TGGCGTGGAT GCCGATGCGG GGGCCGGCCT CAAGGGCGTG
ATACCGGCGC GTTAA
 
Protein sequence
MHGFNHSRTL SIPTSSLPSP WKQQRFLRAI PSLMVLTTAI AWGTASHAGG LALDGALRNG 
VNVAAGPALD AGVSAGVGVD ASAGVKGAGG MAGVDAAGSA GSGANRNITD EQRMAAMAAV
GGDANAQGAA GVEAPGVGRT AGGVRGMGES VGGAAARTGQ RATQGVRSEV SGGLKGGANA
ATNAASGART GMPGIGKAGA AGARLGAGVD ADAGAGLKGV IPAR