Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmob_1879 |
Symbol | |
ID | 5757537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Petrotoga mobilis SJ95 |
Kingdom | Bacteria |
Replicon accession | NC_010003 |
Strand | - |
Start bp | 2075621 |
End bp | 2077813 |
Gene Length | 2193 bp |
Protein Length | 730 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 641303074 |
Product | CRISPR-associated helicase Cas3 |
Protein accession | YP_001568889 |
Protein GI | 160903308 |
COG category | [R] General function prediction only |
COG ID | [COG1203] Predicted helicases |
TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTGT TTGGCTTCCT GAATGGTCAA GAAAGCCATC CGGATAAACT GCTTAAAGAT CATTTAGAAG GAGTCTTCGA AAAATCCAAA GAGATATCAA ATTTTCATGG GTACAATGAT TTAGTTGATC CATTAAAACC TATCTGCTTA ACTCATGATG TAGCTAAATC TCATGTTAAA TTTCAACAAT ATTTAAAGAC AAAAAAAGGA AAATATCCTC ATTCTGAACC TTCTTCTTAT TTAACATTTA TGCTTACAAA GGATGTTTTC CAAGCCGAAA TTGTTAGAAG ACATCATTCA TATCAACTAA ATTTTGAAGA TATAATGTCT TTTTGGAGAA ATTTAAATTA TCAAGACGTT ATAAAAGCAT TAGAAGAATT CCTTGATCTA AACAAAATTG AATATCTAAC AGAAAAGGAA TGGAAAAGAT TAATATTTCA ATCTTGGCAT TCACAGTATC TTTTAAACAA GACGGTTAAA GCTGAAGAAT TATGGTTTAA TACGAGAATC GAGAATTCAA TTTTTATAAC ATCTGATAGG CTAGATGCGT TAAATGTTGA TAGGATCAAT TTTGATAAAA TTTCTTATCA ACAAGATAGG TTCGACAAAT TTCTTGAATC CCTTCCAAAG AACCATTTAA GCGATTGGAA AAACAAAATA AGAGAAAGTA CATTATCAAA CGTTGATACA ATTTCAGAAC CAGGTATCTA TACCATAACG CTCCCAACTG GGGCTGGAAA AACACTCACT GGATTGCAAG CATCGATGAA GTTAGCAAAT AAACTTTCTC TTAAAACAAT TATTTATGTA TTACCGTTCA TAAGTATTGT TGATCAAAAT TCTGAAGTTG CAAAGAAAAT ATACGACAAA GTACAGGAAG ACCATCATTT GGTAAGTGCA TCAAAGGAAA AAGAAGATTT AGATAATTTA GAAAGGTTTA TACTTTCTTT TAGATACTTC AAAGAGCCAC TCATTGTTAC AACCCTTGCA AAGTTTTGGG AAGTGCTTTA TTCTCCTAAT GCCAACGATT CTATGAGTTT CCACAGGTTA AAAGATGCGG TAGTTATTTT GGATGAACCT CAGTCGATTC CCCCTGAATA TTGGCAAGGA TTTGGAGAAA CAATGTCTTT TCTTTCAAAA AAGATGGGAA CTTATTTTAT TTTAATGACC GCTACACAAC CTAAAATAGC AGAAGGTAAA GAGTTAGCTC CTAAATCTTC TTTCCCAAAA AATAGACACT GTTATAACAT AGTTAATGAA AAAATAAAGC TTTCTGATAT TAAACAATTT ACAGCTGATA GAACTGATAA CTCTTCTCTA CTTATTCTTA ACACAAGAAA AGAAGCGTTA AAAGCTTTTA TCTTACTCCG AGAACATTTG AAAAGTAACC TTTTCTTTCT TTCTACTTGG GTAATTCCTA AAGAAAGGTT AGAAAGAATT AAACAGATCA AACAGTTGGA AAATAAAAAC TTGCCAAGAA ATCTCATATC TACCCAGGTA GTAGAAGCTG GAGTAGACTT AGACTTTGAT TACGTTTTTA AAGATTTATC CCCCTTTGAT AGTATCGTGC AAGCTGCTGG AAGATGTAAT AGAAGAATGC TAAATAAACT TGGCACAGTA ATGGTTGCTG AAATAGTAGA TGATGACAGT GAGAATGAAA GATCATATGC TTCTTATGTG TACGATAGCA TATCGCTGAA TAAGACAAAA GAAATTTTTT CCAACAAAAA TAAATTTTCA GAAAACGAAG TTCAAGAACT ACTAGATAAA TATTACACTG CATTGTCAGT GAGTAAATAC CAAAAAGGTC CTTGGTATGA GATAAAAGAA GGGAATTGGA GTAATTATAA ACCTCTAATA AAAGAACATT TATACGAGGA TGTGGTGTTT GTAGATTCGG ATGGAACAGT CTCAAACAAA TTATATGAAA TTGAAAGTTT GGAACATAGT TTAGAAAATT ACGAAAGAAA AAAACAACTA TGGAAAGAAA TTCAAAATTA TTCTATAAAT GTTCCTCACA AAGAACTGGA AGAATGGGAA AACTACTGTA ACGAAGTATT TCTAGAGGAT GACAAAAAGC TTGAGTATAA GGGAAATGGA ATTTGGTTGA TTACCCAATT AGGCATTGGG GAAATCTATT CTGAAGAAGT AGGGTTTATT CCATATGAAT TGAAAGAGGA TTTTCATGGA TGA
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Protein sequence | MKLFGFLNGQ ESHPDKLLKD HLEGVFEKSK EISNFHGYND LVDPLKPICL THDVAKSHVK FQQYLKTKKG KYPHSEPSSY LTFMLTKDVF QAEIVRRHHS YQLNFEDIMS FWRNLNYQDV IKALEEFLDL NKIEYLTEKE WKRLIFQSWH SQYLLNKTVK AEELWFNTRI ENSIFITSDR LDALNVDRIN FDKISYQQDR FDKFLESLPK NHLSDWKNKI RESTLSNVDT ISEPGIYTIT LPTGAGKTLT GLQASMKLAN KLSLKTIIYV LPFISIVDQN SEVAKKIYDK VQEDHHLVSA SKEKEDLDNL ERFILSFRYF KEPLIVTTLA KFWEVLYSPN ANDSMSFHRL KDAVVILDEP QSIPPEYWQG FGETMSFLSK KMGTYFILMT ATQPKIAEGK ELAPKSSFPK NRHCYNIVNE KIKLSDIKQF TADRTDNSSL LILNTRKEAL KAFILLREHL KSNLFFLSTW VIPKERLERI KQIKQLENKN LPRNLISTQV VEAGVDLDFD YVFKDLSPFD SIVQAAGRCN RRMLNKLGTV MVAEIVDDDS ENERSYASYV YDSISLNKTK EIFSNKNKFS ENEVQELLDK YYTALSVSKY QKGPWYEIKE GNWSNYKPLI KEHLYEDVVF VDSDGTVSNK LYEIESLEHS LENYERKKQL WKEIQNYSIN VPHKELEEWE NYCNEVFLED DKKLEYKGNG IWLITQLGIG EIYSEEVGFI PYELKEDFHG
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