Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmob_1801 |
Symbol | |
ID | 5757276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Petrotoga mobilis SJ95 |
Kingdom | Bacteria |
Replicon accession | NC_010003 |
Strand | - |
Start bp | 1977940 |
End bp | 1979799 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641302990 |
Product | polysaccharide biosynthesis protein CapD |
Protein accession | YP_001568813 |
Protein GI | 160903232 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACATT TGTCTAAAAG ATCTTTTAGA TTGATGATAA TTGACTATAT TTTGTTTTTC CTTGCTTACA TTGTTGCAAT GTTCATAAGG TTTCAATTTG ACTTTGTGGA GATGAGAAAG TACATCTCCC CCATCTTTTT CTTTCCTTTG ATTATGGTAA TTGTTTTTTA TTACTCTGGA ATATATAGAT ATATTTGGAG ATTTGCCACT CTTAACGAAT TAAGACCTGT ATTTAATAGT GGTTTCATAG GTTTCCTTAT CAACTTTTTT ATTTTTGAGT TTGTAAGAAG ATATATAAGC GATATTTTTA CACTTCCTTT CAGCGTGGCG GCGACTGCGT CGGTGGTTGG AGTAGTCTTT GTTTCAGCTA GTAGGATATA TTGGTTTTCA AGACATTCTC GAAATTATAA AAAGCGGTTA AACGGAATTA AAAATATTCT TATAATAGGA GCAGGCGATG CAGGAACAGA ATTGTTGGGG GAATACGAAA GGCATCCAGA AGAGGGATCA GTTGTAGGCT TTTTGGATGA TGATCCAGAA AAGATAGGAA GAAACATTCG AGGCTATCCT GTACTGGGGA AAATAAACCA AGTTATGGAT TTTGTTGAAA AATACAATGT TGAAGAGGTT ATAATAGCTA TTCCTAGCGC TTCATCAGAT CAGATAAAAA AAATCATAGA TTATGTTGAT ACATCGAAGG TTAGATTAAA AACTTTGCCA GGAATCTTGG AAATTTTAGA TAACAAGTTA TCACTTGGCT TTCTACGAGA GGTCGATATT TCCGATTTAT TAGGTAGAAA GGAAGTTAGC GTTGATTTAA AAGAGATAAA AGATTACATA AAAGGCAAAA AAATACTGGT TACTGGTGCA GGGGGAAGTA TAGGTTCTGA AATATGTAGA CAGGTTTTAC CAATGGGTCC CAAAGCTCTT TTCTTGCTTG GAAAAGGTGA AAACAGTATT TTTGAAATAT CGAATGAACT GAAAGACAAA TTTTCAGATG CCTTTATAGA AGAAATTATC GCAGATGTAT CCGATGAAAA TAGAATGAGG TATTTATTTT CAAAATATAG ATTTGATGTT GTTTTTCATG CTGCTGCTCA TAAACATGTA CCCCTCATGC AAAAAAATCC AACAGAAGCC TTCAGGGTCA ACACAATTGG GACTTACACT GTTGCAAAAC TTTCAGGGGA ATACAATGTA GAAAGATTCG TTTTTATTTC CACCGACAAA GCCATCAAAC CAACATCCAT TATGGGTGCT TCAAAGAGAC TTGGGGAAAT TATAGTAAAG ACAATGTCTA ATTTTTATCA AACAAAGTAT GGAATTGTAA GGTTCGGGAA CGTTTTGGGA AGTAGAGGGA GTGTAATTCC AATTTTCAAA GAACAGATAC AAAAGGGTGG TCCCGTTACT GTCACACATC CCAATATGAA AAGGTATTTC ATGACTATTC CGGAGGCTGT CTCTTTAGTA TTACAATGTG GACAGTTCGC TCAAAAGGCT GAAATATTTG TTTTAGAAAT GGGAGCGCCT GTCAATATTG ATCGATTAGC AAGGGATTTG ATCAGACTTT CCGGGTATAT CCCTGATCAA GACATTAAAA TAGTTTATAC AGGCATCAGG CCTGGTGAGA AATTATACGA AGAAATATTT TTGGAAGATG AAGATTACGA AAAAACTAGA AACAGACGAA TCTTTATTTC AAAATCCAAC AATCACGAAA TAAATAAAGA GAAGCTAAAT GAATTGATAG ATCGAATAAA TATAATGATA AAAAATCATG ATTACAACAG TGTTATTGAG ATAATAAAAG ATTACATACC AGATTCAAAT ATATCAAAGA TCAGCGAAGA AACTCAATGA
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Protein sequence | MKHLSKRSFR LMIIDYILFF LAYIVAMFIR FQFDFVEMRK YISPIFFFPL IMVIVFYYSG IYRYIWRFAT LNELRPVFNS GFIGFLINFF IFEFVRRYIS DIFTLPFSVA ATASVVGVVF VSASRIYWFS RHSRNYKKRL NGIKNILIIG AGDAGTELLG EYERHPEEGS VVGFLDDDPE KIGRNIRGYP VLGKINQVMD FVEKYNVEEV IIAIPSASSD QIKKIIDYVD TSKVRLKTLP GILEILDNKL SLGFLREVDI SDLLGRKEVS VDLKEIKDYI KGKKILVTGA GGSIGSEICR QVLPMGPKAL FLLGKGENSI FEISNELKDK FSDAFIEEII ADVSDENRMR YLFSKYRFDV VFHAAAHKHV PLMQKNPTEA FRVNTIGTYT VAKLSGEYNV ERFVFISTDK AIKPTSIMGA SKRLGEIIVK TMSNFYQTKY GIVRFGNVLG SRGSVIPIFK EQIQKGGPVT VTHPNMKRYF MTIPEAVSLV LQCGQFAQKA EIFVLEMGAP VNIDRLARDL IRLSGYIPDQ DIKIVYTGIR PGEKLYEEIF LEDEDYEKTR NRRIFISKSN NHEINKEKLN ELIDRINIMI KNHDYNSVIE IIKDYIPDSN ISKISEETQ
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