Gene Pmob_1497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1497 
Symbol 
ID5757407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp1614113 
End bp1615834 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content30% 
IMG OID641302692 
ProductATP-dependent OLD family endonuclease 
Protein accessionYP_001568523 
Protein GI160902942 
COG category[L] Replication, recombination and repair 
COG ID[COG3593] Predicted ATP-dependent endonuclease of the OLD family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCA AATCAATAAC AATCCATAAT TTTCGTTCAT TAAAAGACGC TATGTTTGAT 
TTATATGATT ACAATGTGCT AGTTGGAGCT AACAATGTAG GAAAATCTAA TGTCCTAACA
GCATTAAGGA TTTTCTATGA AAATGAAAAA TACAATGAAA AATTCGACTT TCCAAAATTT
CAAACGGATG ACAATGAAAG CTGGATTGAA ATAGAATATT CGCTGGAAGA TGATGAATTT
CCCAATTTGA AAAACGAATA TAAAAGTTTG AATAACATTC TGAAAGTAAG AAAATATCTT
AAATCGGAAG ATAAAAATAA AGTAAAAAAC AACCAAAGTA ACATATATGG TTACGAAAAT
GGTCACCTTT CAGAAAATTT ATTTTATGGA GCAAAGAACA TTTCAGAGGC AAAATTAGGA
TCAGTTATCT ATATTCCAGA ATTATCCACA ACTGATGAAA CTCTAAAGTT AACTGGACCT
TCCCCTTTAA GAGACGTAAT AACCTTTGTT ATGAAGAAAG TTGTTAAAAC TAGTGAATCT
TTTGATAAAT TAAATACAGC CTTTGAAGAA TTCAATAGTA AATTTAAAGA AGAATCTTCA
AAAGATGGTT TTTCATTAGG CAAAATGATG GAAGAAATAA ATGATAGTTT AAAAGAGTGG
GAAGTAGAAT TTAATTTCAA TATAAATCCT ATAAGGCATG AAGACATAAT AAAAAACTTA
GTTTCACACT ATGTAGTAGA TAAGAATTTA GAGGAAAGAA TAGATGTTAA ATGTCTTGGT
CAAGGACTTC AACGACATTT GATTTACACT CTTCTAAAAC TTTCTTCACA ATATACTGAA
AAGAAAACTT ACGAAAAAAA AGAATTCTTA CCAGAACTTA ATCTAATACT GTTTGATGAA
CCTGAGGCGT TTTTACATCC GGCTCAACAA GAATTTCTTA ACACTAGTTT AAAGTCTTTA
TCCTCTGAAG AGGGCCAACA GGTTATTATA GCGACTCATT CACCAATTTT CATAAGTAAA
AACATCGAGG ATATTCCAGC ATTAATAAAA TTAAAAAGGG ATAAAGGCAT CACGCAGATT
TTTCAGGTAT CAAAGGATAA ACAAAGAAAA ATTATTGAGC AAAATAATGA ACTGGTACAA
ATGCTAAAAA ATAAATTAGT TGAGAAATCA ATTGATCAAG CAATGGAAAA TAGCATTAAA
AATATTATGG GTAGTACAGA GGATGACGAG AGAATGGAAC AGGAAGCAAT TCGTTACCTT
TTATGGCTTG ATTCGGAAAG ATGTTCAGCA TTTTTCGCGG ATATTGTGCT GATATGTGAA
GGAGCTACAG AAAAGACATT TATTGACTAT CTCATAAAAA ACAAATGGAA TGATATAAGG
AAAAAGAGAA TTTATGTTTT GGACGCAATG GGAAAGTTTA ACATTCACCG ATATATGAAT
TTATTTAGGG AATTAGGAAT ATATCATTCC GTTTTAGCAG ACAAGGATGA GAACAAAAAT
GCTCACGAAT TTATTAATCA ATTTATTGAG AAACAGAAAA ACGAGTTTAC CAAATCTATA
GATTTCTTTG ATAAAGATAT AGAATCTTTC CTCGGAATTC CACAAAGCAC TCGAAGAGAC
AGAAAACCAC TAAATGTGAT GTGGCATTAT ATTAATAACG AAATTGATGA GAAGAAAGTT
GATGAATTAA AGGAAAAAAT AACAAAATTG ATAGGTGAAT AA
 
Protein sequence
MKIKSITIHN FRSLKDAMFD LYDYNVLVGA NNVGKSNVLT ALRIFYENEK YNEKFDFPKF 
QTDDNESWIE IEYSLEDDEF PNLKNEYKSL NNILKVRKYL KSEDKNKVKN NQSNIYGYEN
GHLSENLFYG AKNISEAKLG SVIYIPELST TDETLKLTGP SPLRDVITFV MKKVVKTSES
FDKLNTAFEE FNSKFKEESS KDGFSLGKMM EEINDSLKEW EVEFNFNINP IRHEDIIKNL
VSHYVVDKNL EERIDVKCLG QGLQRHLIYT LLKLSSQYTE KKTYEKKEFL PELNLILFDE
PEAFLHPAQQ EFLNTSLKSL SSEEGQQVII ATHSPIFISK NIEDIPALIK LKRDKGITQI
FQVSKDKQRK IIEQNNELVQ MLKNKLVEKS IDQAMENSIK NIMGSTEDDE RMEQEAIRYL
LWLDSERCSA FFADIVLICE GATEKTFIDY LIKNKWNDIR KKRIYVLDAM GKFNIHRYMN
LFRELGIYHS VLADKDENKN AHEFINQFIE KQKNEFTKSI DFFDKDIESF LGIPQSTRRD
RKPLNVMWHY INNEIDEKKV DELKEKITKL IGE