Gene Pmob_1380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1380 
Symbol 
ID5756673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp1487973 
End bp1488884 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content33% 
IMG OID641302573 
ProducttRNA delta(2)-isopentenylpyrophosphate transferase 
Protein accessionYP_001568407 
Protein GI160902826 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase 
TIGRFAM ID[TIGR00174] tRNA isopentenyltransferase (miaA) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.458051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATAAAG TTTTAGTTAT AGCAGGTCCT ACGGCTGTCG GAAAAACAGA AATATCCATT 
GAGATAGCCA GAAGAATTAA TGGTGAAATA ATTTGTATGG ATTCGAGACA AATTTATAGC
CATCTTATAA TTGGTACCGC TACGCCTGAT GAAGAAACAA AAAAATTGGT CCCACATCAC
TTGTATGGTT CAGTAGATCC ACGGACCCAT TTTACAGCTT TTGATTATAA AAAATTGGCA
GAAAAAAAAA TCGGTGAAGT ACTAAATAGA GGAAATACAC CAGTTTTAGT CGGCGGGACA
GGCCTATACC TTGATGCTCT GAGGAAAGGT TTTTTGAATG TAAAATCCGA CTATGGTTTA
AGGACTTATT TAAGAAAATT AGAAACAAAT AATCCTGGTG TTTTAAGAAA GATTTTGGTA
GATTTGGATC CACAAAGAGC TCAAAAGATT CATCCAAACG ACTTGAAAAG GATCATTAGG
GCCATAGAGA TTTATGTTAT AACAGGTATA AAAATGGGTG AAATTGTAAA AGAAAATAGG
CAAGACGAAA ATTCTTTTGA TTACCATATA ATAGTACTGG ATAGAGAAAG GCAAGAATTG
CACGAAAGGA TTAACAAAAG AGTTCATCAA ATGATCGATG AAGGTTTGAT AGAAGAGGTG
CGAAATCTCT TGTCTTTAGG GTATTCTACA ACTCTTAACG CTTTAAACAC CATAGGTTAT
AAAGAAGTGG TACAATATTT ATATGGAAAA ATTGATTTTA ATGAAATGGT TCACCAAATA
AAAGTAAATA CTCGTAACTA TGCCAGAAGA CAGATAATAT ACTTTCGTAA GATAGAAGGT
GCAAAGTGGA TCAATTTGAG TAAAACAAGT CAAGAAGAGG TAGTAGATCA AATATTAAGT
GAATTTATTT AA
 
Protein sequence
MNKVLVIAGP TAVGKTEISI EIARRINGEI ICMDSRQIYS HLIIGTATPD EETKKLVPHH 
LYGSVDPRTH FTAFDYKKLA EKKIGEVLNR GNTPVLVGGT GLYLDALRKG FLNVKSDYGL
RTYLRKLETN NPGVLRKILV DLDPQRAQKI HPNDLKRIIR AIEIYVITGI KMGEIVKENR
QDENSFDYHI IVLDRERQEL HERINKRVHQ MIDEGLIEEV RNLLSLGYST TLNALNTIGY
KEVVQYLYGK IDFNEMVHQI KVNTRNYARR QIIYFRKIEG AKWINLSKTS QEEVVDQILS
EFI