Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmob_1269 |
Symbol | |
ID | 5757625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Petrotoga mobilis SJ95 |
Kingdom | Bacteria |
Replicon accession | NC_010003 |
Strand | - |
Start bp | 1358393 |
End bp | 1359811 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641302471 |
Product | RNA-directed DNA polymerase (Reverse transcriptase) |
Protein accession | YP_001568305 |
Protein GI | 160902724 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.418772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAGATG CGAAGAGACA CGGAAAAAGC ATACAACTTC GATTAGAAGG TTTCCTACAT GAAGATAAGG GAGAGCCTGA AAATAATGTA GAAGCGCCTA GTGTAACTTC TACGTCTGAA AGAGGAAGAA ACGATGATAA AGGATACAGT GAAGGGATGC TTGAAAAGAT ATTATCCAAG GATAATATGA ATAAAGCATA TAAGAAGGTA AAGGCCAACA AAGGAGCCCC TGGAATAGAC GGGATGGAAG TAGAAGAACT CTTTGAATAT CTCAAACAAC ATGGAGAAGA ATTAAGGCAA GAGCTCCTTG AAGGAAGGTA CACCCCGAAC CCGGTAAGGA GGAAAGAGAT ACCGAAACCG GATGGAGGGA AAAGACTACT AGGCATACCA ACAGCAATAG ACAGAGTAAT CCAACAATCC ATAGCCCAGG AACTGATACC GATTTATGAA AAGAAATTTG TAGATAACAG CTATGGATTT AGGCCATTAC GAGATGCAAA ACAAGCCATA CGGAAAAGCA AAGAATACCT AAACGAAGGA CACACGTGGG TAGTGGACAT AGATTTAGAA CGATACTTTG ACACAGTCAA CCATGACAAA CTGATGAGGA TAATATCAAA AGACGTAAAA GATGGCAGAG TGATATCCCT GATAAGGAAA TACCTCAAGA GTGGGGTAAT GGTAAATGGG GTAGTAATAG AAACAGAAGA AGGGACTCCG CAAGGGGGAC CGCTATCCCC ATTACTAAGC AACATAATGC TCCACGAACT TGACGTAGAA CTAACGAAAA GGGGACACAA GTTTTGCAGG TATGCAGACG ATTGCAACAT ATACGTGAAA AGCGAGAAAT CCGCATATAG GGTGATGGAA AGTATAACAA AATACATAGA GAAGAAATTA AAGTTAAAAG TGAACAGGAA GAAAAGCAAA GTAGTCAAGC CTTTGGACCT CAAATACTTA GGGTTCTCCT TCTACGGGAA AGAAGAGCAA TACGAAATCA GAGTGCATGA GAAATCCATC AAAGAATTTA AAAAGAAGTT AAAAGAAGAA ACGAAAAGAA GCAGTGGAAG GAGCATGACA TACAGGCTGT CAAAGATAAA ACAAATAATA ACAGGATGGA TAAACTACTA TGGAATAGCA AACATGAAAT CGGCAGCGGA AAGTCTTGAT GGATGGCTTA GAAGGAGAAT TAGGATGTGT ATCTGGAAGG AATGGAAGAA AATCAAAACA AGGTATAAAA ACTTAGTCAA ATTAGGACTA AACACATACA AAGCATGGGA ATATGCAAAC ACAAGAAAAG GCCATTGGAG GATCTCCAAC AGCCCGATAC TTTCAAGAAC ACTAACTAAT AAGCACCTTA AGGAAATTGG ATTAACTTCG ATCCTGGAAA CATATAACCT AAAACATCAA TTCTGTTGA
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Protein sequence | MKDAKRHGKS IQLRLEGFLH EDKGEPENNV EAPSVTSTSE RGRNDDKGYS EGMLEKILSK DNMNKAYKKV KANKGAPGID GMEVEELFEY LKQHGEELRQ ELLEGRYTPN PVRRKEIPKP DGGKRLLGIP TAIDRVIQQS IAQELIPIYE KKFVDNSYGF RPLRDAKQAI RKSKEYLNEG HTWVVDIDLE RYFDTVNHDK LMRIISKDVK DGRVISLIRK YLKSGVMVNG VVIETEEGTP QGGPLSPLLS NIMLHELDVE LTKRGHKFCR YADDCNIYVK SEKSAYRVME SITKYIEKKL KLKVNRKKSK VVKPLDLKYL GFSFYGKEEQ YEIRVHEKSI KEFKKKLKEE TKRSSGRSMT YRLSKIKQII TGWINYYGIA NMKSAAESLD GWLRRRIRMC IWKEWKKIKT RYKNLVKLGL NTYKAWEYAN TRKGHWRISN SPILSRTLTN KHLKEIGLTS ILETYNLKHQ FC
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