| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1208 |
|---|
| Symbol | |
|---|
| ID | 5757729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | - |
|---|
| Start bp | 1291103 |
|---|
| End bp | 1292284 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641302413 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_001568248 |
|---|
| Protein GI | 160902667 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG CTTATTTTGG TCAGTATGGA GGTAGATACG TTCCAGAGAC ATTGATTCCA
GCGCTCGAAG AGTTGGAGGA AGCTCACGAA AAATATTCAA AAGATCCTGA TTTTATAAAT
GAATACCAAG GTTTGTTGAA AGATTACTGT GGAAGGCCCA CCCCTTTATA TTTTGCTGAA
AGATTTACCG AATATCTTAA TGGTCCAAAA ATATATCTAA AAAGGGAAGA TTTAAACCAT
ACGGGGGCGC ACAAAATTAA TAACGCGTTG GGGCAAGTAT TACTTGCAAA AAGAATGAAT
AAAAAAAGAA TAATAGCAGA GACCGGTGCA GGCCAGCATG GTGTGGCAAC AGCAACCGCT
GCAGCTAGAT TTGGGTTGGA ATGTATAGTT TACATGGGGG CAGAAGATAT CAGAAGACAA
GCGCTCAATG TATACAAAAT GAGGATGTTG GGAGCAAAAG TAGTGCCTGT ATACAGCGGT
AGCCAAACTT TAAAGGAAGC CATAAATGAA GCTATTAGAG ACTGGGTTAC AAACGTAGAA
AACACCCACT ACGTTATAGG TTCTGTTGTA GGACCACATC CATACCCTAA AATAGTTAGA
GATTTTCAAA GGGTTATTGG TGATGAATCT AAAAATCAGA TTTTAGAAAA AGAAGGAAGG
TTGCCTGATT ATATAGTTGC ATGTGTTGGC GGAGGTAGTA ACGCTATGGG TATATTCTAC
CCTTTTATAG AAGATAAAGA TGTTGAATTG ATAGGAGTGG AAGCTGCAGG AAAAGGATTA
GAAACTGGCC AACATGCCGC TTCTTTAACT GCGGGGAAAA TAGGGGTCCT TCACGGGAGT
AAATCTTACG TCTTACAAGA TGATGACGGT CAAATTCAAC TGGCATATTC TATTTCTGCA
GGTTTAGATT ATCCGGGTGT GGGACCTGAA CATAGTTATC TACATGATGA AAAAAGAGCT
CAGTATGTAT CGATAACAGA TGAAGAAGCG TTGAAAGGTT TTGAACTTTT AACGAAATTG
GAGGGAATCA TCCCAGCATT TGAAAGTTCC CATGCAATAG CTTACGCTAT GAAAATTGCA
CCATCACTTG ATAAAGATAA AATCATGGTA ATAAATCTTT CTGGAAGAGG AGACAAAGAT
GTCGATTCTT ATATAAAACT TGGTAGGGAG GCACTAGAAT GA
|
|---|
| Protein sequence | MKKAYFGQYG GRYVPETLIP ALEELEEAHE KYSKDPDFIN EYQGLLKDYC GRPTPLYFAE
RFTEYLNGPK IYLKREDLNH TGAHKINNAL GQVLLAKRMN KKRIIAETGA GQHGVATATA
AARFGLECIV YMGAEDIRRQ ALNVYKMRML GAKVVPVYSG SQTLKEAINE AIRDWVTNVE
NTHYVIGSVV GPHPYPKIVR DFQRVIGDES KNQILEKEGR LPDYIVACVG GGSNAMGIFY
PFIEDKDVEL IGVEAAGKGL ETGQHAASLT AGKIGVLHGS KSYVLQDDDG QIQLAYSISA
GLDYPGVGPE HSYLHDEKRA QYVSITDEEA LKGFELLTKL EGIIPAFESS HAIAYAMKIA
PSLDKDKIMV INLSGRGDKD VDSYIKLGRE ALE
|
|---|
| |