| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1178 |
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| Symbol | |
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| ID | 5758306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Petrotoga mobilis SJ95 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010003 |
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| Strand | + |
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| Start bp | 1262713 |
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| End bp | 1263360 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641302384 |
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| Product | hemolysin III family channel protein |
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| Protein accession | YP_001568219 |
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| Protein GI | 160902638 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAAGATT TAGACAATAT CGAAAAATTC ACCACTGGTG AAGAAGTAGC TAATGCCGTT
ATACACGGTA TAGGAGCATT GTTGAGTATA GCTGCTCTGG TGTTATTGGT AGTTTTTTCA
GCGATTAACG GACAACCTTG GAGTATTTTC AGTTCGGTTA TATATGGTTC ATCGTTGATT
ATTCTTTATT TATCTTCAAC ACTATATCAC AGCTTTCAAC GTAAAAAAAT CAAAGATCTC
TTTGAAATAT TCGATCATTC TGCAATTTAT ATTTTAATAG CCGGTACTTA CACACCTTTT
GCACTAATTA CGTTGAGTGG AAGGCTAGGT TGGATTATAT TTTCTGTGGT ATGGGTTTTG
GCAGCTATAG GCATTATTTT TAAAATATTT TTCGTTAAAA GGTTTAGGAT CCTTTCAACA
ATTTTATACA TAGCCATGGG ATGGTTGGTT GTGTTTGCTA TGGAACCTTT AGTTACAAAC
TTGGATTTCT GGGGAGTCTT TTGGTTGGTT ATAGGAGGCA TTCTTTACAC ACTCGGGACC
ATATTTTACG TGTGGAGAAA AATCCCATAT CATCATGCTT TATGGCATTT GATAGTACTT
GCAGGAAGTA TATGCCACTT TTTCTCAGTG TTTTTTTATG TTATATGA
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| Protein sequence | MKDLDNIEKF TTGEEVANAV IHGIGALLSI AALVLLVVFS AINGQPWSIF SSVIYGSSLI
ILYLSSTLYH SFQRKKIKDL FEIFDHSAIY ILIAGTYTPF ALITLSGRLG WIIFSVVWVL
AAIGIIFKIF FVKRFRILST ILYIAMGWLV VFAMEPLVTN LDFWGVFWLV IGGILYTLGT
IFYVWRKIPY HHALWHLIVL AGSICHFFSV FFYVI
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