Gene Pmob_1174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1174 
Symbol 
ID5756580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp1258581 
End bp1259720 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content31% 
IMG OID641302380 
Productmajor facilitator transporter 
Protein accessionYP_001568215 
Protein GI160902634 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.394628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACCGAAA AGAACACGCG AAATTTTATA TACATCTCAA TGATTCTATT TTCGATGGTC 
ATGAATACTC TTGCTCCTCT TATGACTTCC ATTCAAGAAA GATTTTCTGT TTCGATAACT
ATTTCTTCTT CATTACCGTT TATAAGTACC TTTGGTACCA TGATATCCAA CTTTATAGGC
AGCTTTTTTA TCGCCCAGAT AGGTTATAAA AGTTTTTTGA CCGGTGCTTT TATAATTGAA
ATTTTAGGTT TGGTTTTATT CGTAACCGCA ATTAATTTTC CTATGATTGT ATTATCAGCT
TTTTTATTGG GGGTAGCGAC TGGGGCAACT TTTATGACTT TAACTTCCGC TTTTTCACAC
CTTGATAGAA AAATCCAAAA TTTTGGATTT TTAAATGCGA GTTTTGGAAT TGGGGGAATA
ATAGCACCCC TTTTGGTTAG CTTATTTTTA GTTATGAAAT TAGATTTTAG ATTTGTGTAT
TTTATACACT TAATCTTAAT TTCGTTACTT TTCATTTTTG TTTTAATTTA TAAGCCCATT
CAAAACATAA AGTATGAAGC GATTAAATTT AAAGAAGCCA CCGGTATAAT TAGAAAAAGA
TTTGTTTATT TATCATTGTT GATATTTTTA TTCTATTCCG GAAGTGAAAT TGGCATAATA
ACATGGAGCG GAAACCTTTT CCATGATGTT TTTAACTATT CTAAAGAATT TTCATCTGTA
ATTATAAGTT TATTTTGGGT AGTTTTTACC TTTGGTAGAG CTATTACCGA ATTCTTAAAC
AGAAAATTAA CGGAATTGGG AACCATTTTG TACTTCTCTA TTTCTCTTAT AATAAGTCTT
GCATTTTTGC TAATATTTCA GCACTTTATT TTCTTTCTTT TCGTTGGTTT TAGTTTATCT
GCCATTTTTC CAAGCATTCA AAAATACACC AATCAAAATC TCCCAAAGAG AATCTTAGGG
ATGTACAACG GGTTGGCTTT TGGTTCTACT GGGATTGGGG CTATGATAAT TGCAACTTCC
ATGGGAGTAA TTGGTGATAT TAATTTTAAT ATCTCATATA CCATTCCCTT TTTAACTTTT
ACTATCATCA TTTTTATCAC ACAAAAATTG GGTAAGGAAA AGTTAGAAAG TGATAAGTGA
 
Protein sequence
MTEKNTRNFI YISMILFSMV MNTLAPLMTS IQERFSVSIT ISSSLPFIST FGTMISNFIG 
SFFIAQIGYK SFLTGAFIIE ILGLVLFVTA INFPMIVLSA FLLGVATGAT FMTLTSAFSH
LDRKIQNFGF LNASFGIGGI IAPLLVSLFL VMKLDFRFVY FIHLILISLL FIFVLIYKPI
QNIKYEAIKF KEATGIIRKR FVYLSLLIFL FYSGSEIGII TWSGNLFHDV FNYSKEFSSV
IISLFWVVFT FGRAITEFLN RKLTELGTIL YFSISLIISL AFLLIFQHFI FFLFVGFSLS
AIFPSIQKYT NQNLPKRILG MYNGLAFGST GIGAMIIATS MGVIGDINFN ISYTIPFLTF
TIIIFITQKL GKEKLESDK