Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmob_1068 |
Symbol | |
ID | 5758113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Petrotoga mobilis SJ95 |
Kingdom | Bacteria |
Replicon accession | NC_010003 |
Strand | + |
Start bp | 1137103 |
End bp | 1138392 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641302274 |
Product | extracellular solute-binding protein |
Protein accession | YP_001568110 |
Protein GI | 160902529 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.501776 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGAAAG TTGTTTCTAT TCTTTTCACG GTTTTACTTG TTTCTTTTGC TTTTTCTCAA GTCGAGATAG AGTTTTGGCA TGGCATGGGA GGACAGCTGG GAGAAACTCT GAATTCCTTA GTCGATACTT TTAATAGGGA AAACCCAGAT GTTCATGTGT CAGCCATATA TGTGGGAAAC TACAGTGCAT TAAACCAAAA GTTACTTTCT ACGATCACCG CTTATTCCCA AGGAAGTACC ACAGACCTTC CAACTTTATC TCAAGCTTAT GGAAACTGGA CCGCAATGTA CCTGTTTTCT GATGTAGTGC AACCACTCAA CGGATATATT GAAAAGGATC CTGAGTTTAA AGAAGCTTGG GATAATCAGA TATTCCCTGT TCTAAAGGAT TTAGTTACAT GGGGAGACAC AGTATATGGA ATCCCATTTA ACAAATCTGT TTATGTTTAT TATTATAACC CTGATCTATT TGACTTATTT GGAATCGATC CCCCAAAAAC TATGGATGAA TTATGGGAAG TAAGTGAACT TTTAACAATG GATTTAGACA TGGATGGAGA AACGGATCAA TATGGATTAG GTGCGAGAAA CTTTATCGAC GATTTTCAAA TATTCTTATA TGCATATAAC GCAACATTTT TAGAATACGT CGGCGATGGC AAATACAGAG TTGTTTTACC TGAAGAAGAA ACAAAAGAAG TTTTAACATT CATAAAGAAC CTGAAAGATT CTGGATACGC TTTGTTCCAA AACGCATATT TGGATCCCCA GTTTGGCTCT GGAGAAATAG CCGCATACAT GGGAACGGTT GCAGGTTTAA CTTATGCTGA ACAATCGTCC AGAGGAAAAC ACGGTGTTGC TTGGGCTCCA TTACCTTCTG TAGATGGTGT CCCTCACTCT CCTATAGCTG GAACTGATGT GATAATGTTT AACTGGGTAA GCCAAGAGCA AAAAGACGCA GCTTGGAGAT TCTTGAAATT TTTGATGGAT CCCGTTAACG TTGCATACTG GTCTATAAAT ACTGGATATG TTCCAATAAG AAGAGATGTT GAAGAGGTTC CACAGTGGCA AGCCTATACA GCAACAGATG ATAAGCCAAG TATTGCACTT AACGAATTAG AAACCGCTAT CCCAGATCCA AAACCAGCTG CATGGAACGA TATAAGAAAT GATATCAGTA CATTATTTGC TAACTTCCTA AACGATATGG CAACTGTAGA TGAGACATAC GATGCCATCG TGAATACTTT AGAAACAGGA TTAAAGGAGA CAGGCGAATA CGCTGAATAA
|
Protein sequence | MKKVVSILFT VLLVSFAFSQ VEIEFWHGMG GQLGETLNSL VDTFNRENPD VHVSAIYVGN YSALNQKLLS TITAYSQGST TDLPTLSQAY GNWTAMYLFS DVVQPLNGYI EKDPEFKEAW DNQIFPVLKD LVTWGDTVYG IPFNKSVYVY YYNPDLFDLF GIDPPKTMDE LWEVSELLTM DLDMDGETDQ YGLGARNFID DFQIFLYAYN ATFLEYVGDG KYRVVLPEEE TKEVLTFIKN LKDSGYALFQ NAYLDPQFGS GEIAAYMGTV AGLTYAEQSS RGKHGVAWAP LPSVDGVPHS PIAGTDVIMF NWVSQEQKDA AWRFLKFLMD PVNVAYWSIN TGYVPIRRDV EEVPQWQAYT ATDDKPSIAL NELETAIPDP KPAAWNDIRN DISTLFANFL NDMATVDETY DAIVNTLETG LKETGEYAE
|
| |