Gene Pmob_1039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_1039 
Symbol 
ID5757644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand- 
Start bp1105091 
End bp1105732 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content33% 
IMG OID641302247 
ProductTetR family transcriptional regulator 
Protein accessionYP_001568083 
Protein GI160902502 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0390412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCGAA ATAGTTTGGA GAAGAAAAAT AAAGAGGGAA AATTGAATTT AATAATGAAT 
GTAGCAGAAA AAATTTTTGT TGAAAAAGGT TATGAGAAAG CTACAATGAC CGAAATTGCA 
AAGAAAGCTA ATCTTGCAAA AGGGACGTTG TATTTGTACT TTTCAAGCAA AAAAGATCTA 
TATTTTACCT CTGTTGAAAG AGCGTTATCT GCTTTGCTCA GGTCTATTAT TGAAAAATTT 
TCCTCTTGTA AAAACGGTTT TGAAAAGGTT GTATCAATGG GAGAAACATA CGTATCATTC 
AGCCTTGAAT ATGTTGATTA TTATAAGTTG ATATTGAATT ATGAAACCTT GGAAGTTCGT 
TTCGATGACA AAGATCCCCA TGTGAAGAAG GCATATGAAA AGAGTGAAGA GATTTTTAAG 
TTGTTAGTTA GTTCCGTTGA AGAAGGGATA AAAGATGGTT CAATAGACGA AAGATTAGAG 
CCTATAAAGA TCGCAATGGT TTTGTGGAGT GAGATAACAG GAATGGTTCA GCAAGCAAGT 
CTTCGAGAGA CATTGTACAA AAAATGGGCG GGGTTGAAAC CTCAACAAAT ATATGAGTAT 
TACATAGAAG TAACAAAAAA GATGTTGGCT TCTTCATCAT AA
 
Protein sequence
MRRNSLEKKN KEGKLNLIMN VAEKIFVEKG YEKATMTEIA KKANLAKGTL YLYFSSKKDL 
YFTSVERALS ALLRSIIEKF SSCKNGFEKV VSMGETYVSF SLEYVDYYKL ILNYETLEVR 
FDDKDPHVKK AYEKSEEIFK LLVSSVEEGI KDGSIDERLE PIKIAMVLWS EITGMVQQAS 
LRETLYKKWA GLKPQQIYEY YIEVTKKMLA SSS