| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0925 |
|---|
| Symbol | |
|---|
| ID | 5756809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | - |
|---|
| Start bp | 978612 |
|---|
| End bp | 979814 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641302134 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001567971 |
|---|
| Protein GI | 160902390 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00183083 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTAAAC TGACGCAAAA GGTTATTAAT CTGCTTATTT TTTCGTCCAT AAGTAGCTCT
TTTTGGGCAA TTTATAGGGT TGTTTTTAAT TTATTTTTAA GAGATTTAGG TTATACAAAT
CAGTTCATTG GTCGAATGAC CTCTTTTGAG ATGTTGGGTG CTGCCATCCT AGGGATCTTA
ATAGGGATCC TGGGGGATAG AATCGGAAAG AAAAAAATGA TAATTATATC TTCAATAAGT
TTTGGCATTC TATTATTGAT CAGAAGTACG TTTCCCTATA AAAATATTTT ATTAATCCTT
GGATTTTTAA ATGGTGGATT CATGACCTCT AGGAGATTAC TTTTGGATTC TTATCTGATG
GATGTTACCG ATAGTTCAAC TCGAGGAGCT GCTTTTGGAT ACAATTTTGC TATTTTTATG
GCTAGCGGTG TTTTAGGGAA TTTCGTAGGT GGTTTTATGG GAGAATATCT GGGTTTAGGG
TTGACTCTTT ACATAACAGG GATATGTTAT GCCATATCAC CCATATTATT AAGAAAATTA
CCCGAAAGCG TTAGAGATAA AAGAGTCACC CTTCAAAAAG TTTTAGACTT TTCCCAATAC
AACAAAGAAG AAAAATACAT TTTAAAGTAC TATCTTTTAA GAACGGCAGC AATATCTTTT
GGAGCGGGAT TGTTTGTCAA TTTTGGGAAT ATTATATACA AAGACCTCTT CAACATGTCT
CCTTCCTTGA TAGGTATATC TCTGTCAATT GCACAATTTG GGGCGGCTGC TGGCTCTGCC
CTTTCACCAG TACTTGGTAA AAGATTTGGT CCTTTTAAAT ATACATTCAT TTTAAATGGT
ATAGTTATTC CGTTGATTAT ATGTTTAGGT TTCATCCGAA ATCCTTTTGT TTTTGTTGTT
ATTTATGCAC TAAGATTTAC TTTCACAAAT ATGACCAACC CTGTGGAAAC ATCCTCTGTT
TTGAGTGCTC TACCAAAGAA TAGAGTCACA TCGATATATA GCCTTAGAAA CGCCGCCAAT
TTTTTGACAA GGTCTTTGGC TGCATTTATA TTTGGAATCG TAAGTGTATT ACCAAGTGGT
TATACTTACT TGTTCTTAAT TAGTTCAGTG TTTTATACGC TCGCACTAAT TTTCATGTTT
AAATTATTCG TTCCTTTGAG GAAAAACGGT GTTTTGCATC AATTGTACAG TAATAATTCA
TAA
|
|---|
| Protein sequence | MSKLTQKVIN LLIFSSISSS FWAIYRVVFN LFLRDLGYTN QFIGRMTSFE MLGAAILGIL
IGILGDRIGK KKMIIISSIS FGILLLIRST FPYKNILLIL GFLNGGFMTS RRLLLDSYLM
DVTDSSTRGA AFGYNFAIFM ASGVLGNFVG GFMGEYLGLG LTLYITGICY AISPILLRKL
PESVRDKRVT LQKVLDFSQY NKEEKYILKY YLLRTAAISF GAGLFVNFGN IIYKDLFNMS
PSLIGISLSI AQFGAAAGSA LSPVLGKRFG PFKYTFILNG IVIPLIICLG FIRNPFVFVV
IYALRFTFTN MTNPVETSSV LSALPKNRVT SIYSLRNAAN FLTRSLAAFI FGIVSVLPSG
YTYLFLISSV FYTLALIFMF KLFVPLRKNG VLHQLYSNNS
|
|---|
| |