| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0924 |
|---|
| Symbol | |
|---|
| ID | 5757432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 977700 |
|---|
| End bp | 978617 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641302133 |
|---|
| Product | ribokinase-like domain-containing protein |
|---|
| Protein accession | YP_001567970 |
|---|
| Protein GI | 160902389 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | [TIGR02152] ribokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.108155 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCTG TAATTGGTAG CAGTAACATG GATATTGTAT TCAACGTTGA ACATTTTACA
CTTCCTGGAG AAACCCAAAA AGCCCTTTCC TTGGACTTTT ATTTTGGGGG CAAAGGGGCA
AATCAAGCAG TTGCAGCCGC TAAGTTATCT GAAAAGCCTG TTTACTTTTG TAGCTGCCTA
GGTGATGACG AATATGGGAA TCAAATTTCT CAAAACTTTA AAAAGTATAA AATAGAAGGT
TATTACGTGC AAAAGAATGA AAAAACAGGT AGGGCTTATA TAGAGGTTGA TAAAAATGGC
GAAAATAGAA TAATTATCTT CTCGGGTGCC AACGATAATG TGGACAAAGA GAAAATAGAT
AAGTTTTTTG ATCAATATGG TGATGAAATA GATATTTGTT TATTGCAGAA TGAAATTCCC
ATGCAAAGCG TTGAGTACGC TATTTCTAAG TTAAAAGAAA AAAGGATAAC TATTATTTAC
GATCCTGCCC CTGTTGGAAA TACAAAGATA GAAAGTTTAA ACGGTATAGA TTTTTTAACT
CCCAATATTA AAGAGTTTAT GTTCCTTTGT GAAAAAGAAA AGATAGATTT CGACGAAAAC
AACCTCGACA AATCAATGCT TGAATTTAAA AGAATTAGCA AGGTAAAAAA TTTGATTGTA
AAGATGGGAG ATAAAGGCGT TATATACATT GATGAAGATG AAAACTTAGC GAAAATTGAA
CCTCTAAAAA TAAAAGCTGT TGATAGTACC GGTGCAGGAG ACATCTTTAA TGGAGCATTT
GCCGTAGCTT TTTCAGAAAC AAAAGATTTA AAGAAAAGCC TTAACTTTGC CAATACCGCC
GCCGCAATTT CTGTTGAAAG AAAAGGAGCT CAGTCTTCAA TCCCTAAAAA GGAAGAAGTA
TTAAAACGCT TTTTATGA
|
|---|
| Protein sequence | MIAVIGSSNM DIVFNVEHFT LPGETQKALS LDFYFGGKGA NQAVAAAKLS EKPVYFCSCL
GDDEYGNQIS QNFKKYKIEG YYVQKNEKTG RAYIEVDKNG ENRIIIFSGA NDNVDKEKID
KFFDQYGDEI DICLLQNEIP MQSVEYAISK LKEKRITIIY DPAPVGNTKI ESLNGIDFLT
PNIKEFMFLC EKEKIDFDEN NLDKSMLEFK RISKVKNLIV KMGDKGVIYI DEDENLAKIE
PLKIKAVDST GAGDIFNGAF AVAFSETKDL KKSLNFANTA AAISVERKGA QSSIPKKEEV
LKRFL
|
|---|
| |