| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0160 |
|---|
| Symbol | |
|---|
| ID | 5756916 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 161304 |
|---|
| End bp | 162077 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 641301360 |
|---|
| Product | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase |
|---|
| Protein accession | YP_001567230 |
|---|
| Protein GI | 160901649 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATTTAA AAGCCTTTGG GAAAGTTAAC CTTTACTTAG ATGTAATTAG TAGGAGAAAA
GATAATTACC ATAATATTTT AACCCTTTTC CAATCTATTA ACGAACACGA CGATATATTT
ATTGAATTTT CTGAAAGTGA AATATTCGAA TCAGAACCTC CTTTAAATAT TTCATGGGAT
AATAATATAA TAAAAAAGTC CATAGAGACC TTTAAAAAAG AAACGGGTTT TGACAATTTT
AACTTAAAAA TTAAGCTTAT TAAGAATTTA CCTATGGGTG GAGGACTAGG GGGTGGAAGT
GCCGACGCTG CTGCTGTCTT AAACTTCCTT TCAAAGAATT TTAAAATATC AGAAAAAGAC
TTATTCGAAA TAAGTTGCAA AATCGGGAGT GATGTCCCAT TTTTGCTAAA AGGTGGAACC
GCTATAGGTA AAGGGAAAGG AGAAATTTTG GAATTTTTGG AACCTTTAAA ATTAAATATT
CAAATATACC CCATGAACTA TAATATTGAT ACTAAAAAAA TGTACGAAAA ACTTGATCAA
AATTGGAAAA GTATAAACCA TTTCGGTGAT CCATACAATT TGTACGAAGC TTTAAAAAAT
AACGACATTA TAACTGCTAA ACAAAATGCG TTTAACGTAT TCGAACAAGT GGCATTCAAA
GAATATCCTA AATTGAAGCA AAAAAAGGAA GACATGGAAA AGGATGAAGG AATTATATTT
GCTTTGATGT CTGGTTCAGG TAGTACATTA TACAAAGTAA TTTATGCTAA CTGA
|
|---|
| Protein sequence | MHLKAFGKVN LYLDVISRRK DNYHNILTLF QSINEHDDIF IEFSESEIFE SEPPLNISWD
NNIIKKSIET FKKETGFDNF NLKIKLIKNL PMGGGLGGGS ADAAAVLNFL SKNFKISEKD
LFEISCKIGS DVPFLLKGGT AIGKGKGEIL EFLEPLKLNI QIYPMNYNID TKKMYEKLDQ
NWKSINHFGD PYNLYEALKN NDIITAKQNA FNVFEQVAFK EYPKLKQKKE DMEKDEGIIF
ALMSGSGSTL YKVIYAN
|
|---|
| |