Gene Pmob_0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_0050 
Symbol 
ID5756742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp45290 
End bp46249 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content34% 
IMG OID641301251 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_001567122 
Protein GI160901541 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.977686 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAATA GTAAGGATTT TAAAATTGTT TTCATGGGGA CACCTGATTT TGGTGCCCAA 
GTTTTGGAAG AACTAATAAA AAACAATTTC AATGTTGTTG GAGTATTTTC CCAACCTGAC
AAACCTAAAG GGCGGGGGAA AAAGTTTCAA CCACCAGCGG TTAAGGAAGT TGCCCTAAAA
TACAATGTCC CGGTATTTCA ACCAAAAAGC GTTAATAAGG GAGAGGGGTT TGACTTTTTG
AAAGAGCTGA ACCCTGACAT TATTATCACC GCAGCTTTTG GAAAAATATT AAAAACAAAT
GTTTTAAAAC TTCCACCTAA AGGATGTTGG AATGTACATG CTTCTTTATT GCCAAAATAT
AGAGGAGCAG CCCCAATTCA ACGCGTTATA GAAAATGGAG AAAAAGAAAC GGGAATCAGT
ATTTTCAAGA TGGTAGAAGC TCTTGATGCG GGAGATATAG CCATTCAAAA AAGTGTCCCC
ATTGAAATAA ACGACAATTA CGGCATAGTT TATGAAAAAT TATTATCACT TGCAAAAGAA
ACTGTTTTAG AGTTTTTGAA CTCATTCGAT CATTTAACTT TGAAACCACA AAACGAAGAA
GAAGCCTCAT ATGCAGAAAA AATTACAAAA GAAGATCTAA TTGTAGATTT TAATAATGAT
GCTATAAAGG TTCATAACAA GATTAGAGCT TACGATCCAT ACCCCGGGGT AAGAAGCGTC
TACGAAAAAG AAGAGGTAAA GATATTTGGT TCGGAATTTT CTGATGATTT GTTTACAATA
GAAAATAAAG AAGAACCAGG AACAATAATA CGTATTGAAA AAGACGGAAT ACTTGTAAAA
TGTAGAGATG GGGCTGTAAA GATAAAAGAG ATACAATTCC CTGGTAAAAA AAGAATATCT
ACAATAGATG CCATCAATGG GAAAAAACTA AAATTATTGG GACATTTCAG CCCTTATTAA
 
Protein sequence
MTNSKDFKIV FMGTPDFGAQ VLEELIKNNF NVVGVFSQPD KPKGRGKKFQ PPAVKEVALK 
YNVPVFQPKS VNKGEGFDFL KELNPDIIIT AAFGKILKTN VLKLPPKGCW NVHASLLPKY
RGAAPIQRVI ENGEKETGIS IFKMVEALDA GDIAIQKSVP IEINDNYGIV YEKLLSLAKE
TVLEFLNSFD HLTLKPQNEE EASYAEKITK EDLIVDFNND AIKVHNKIRA YDPYPGVRSV
YEKEEVKIFG SEFSDDLFTI ENKEEPGTII RIEKDGILVK CRDGAVKIKE IQFPGKKRIS
TIDAINGKKL KLLGHFSPY