Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmob_0002 |
Symbol | |
ID | 5757697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Petrotoga mobilis SJ95 |
Kingdom | Bacteria |
Replicon accession | NC_010003 |
Strand | - |
Start bp | 1526 |
End bp | 2323 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641301203 |
Product | Linocin_M18 bacteriocin protein |
Protein accession | YP_001567074 |
Protein GI | 160901493 |
COG category | [S] Function unknown |
COG ID | [COG1659] Uncharacterized protein, linocin/CFP29 homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000133397 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTTC TTAAAAGAGA GTTAGCTCCA ATAACTGAAG AAGCTTGGGA AGAATTAGAC GAAAGGGCAA AGGAGATTTT TAAGAACAAA TTAAAAATAA GACCAATTAT TGATGTTGAA GGTCCTTATG GATGGGATTA TTCTTCATAC AATTTAGGTA CCAACGAGCT TATAGAAAAC CCAAGAGATG GATTGGGATG GGGAATAAGA CAAGTTTTAC CTATAGTAGA GATTAGAAAC CCATTTGTTT TGAAACAATG GGAGCTTGAT AATATCGAAA GGGGCTTAAA AACTCCGGAT TTGGAAGGGT TAGAAACCGC TGCTAAGCAG TTGGCTTCCT TTGAAAATAA ATTAATTTTA AAAGGTATAG AAAAAGCCAA TATAATTGGC TTGCAAACGC TTGCTAAACA AAATTCTGTG GAGAGCTCCA AAGAAAGCCT TAAAGATTTT GTTAAATCTT TATTTGAAGT AAAAAAGAGA TTCATGGAGC AAGGGATTGA GGGACCGTAT ACTTTAGTGA TCAACAAAGA ATTATGGCAA GATTTATTTA CCATGAATCT ATCGTATCCT TTGGATTTGG TTGTTAAAGA AATTATAGAC GCCAAAGTGA AACCTATGCA TGAAGTGGAT GAAAGTTTTG TGGTTTCTAA CCGTGGTGGA GACTTTAAAT TAATTTTAGG CCAAGATATT TCCTTAGGAT ATGAAAGCAA GTTTGACGAG CAGCTCAAAT TTTTCTTCAC TGAAAGTTTA ACCTTCCATG TAGTAACGCC AGAAGCTATA GTGGGTTTAG AAATGTAA
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Protein sequence | MDFLKRELAP ITEEAWEELD ERAKEIFKNK LKIRPIIDVE GPYGWDYSSY NLGTNELIEN PRDGLGWGIR QVLPIVEIRN PFVLKQWELD NIERGLKTPD LEGLETAAKQ LASFENKLIL KGIEKANIIG LQTLAKQNSV ESSKESLKDF VKSLFEVKKR FMEQGIEGPY TLVINKELWQ DLFTMNLSYP LDLVVKEIID AKVKPMHEVD ESFVVSNRGG DFKLILGQDI SLGYESKFDE QLKFFFTESL TFHVVTPEAI VGLEM
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