| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4603 |
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| Symbol | |
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| ID | 5106913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 5053312 |
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| End bp | 5054082 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640505873 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_001190081 |
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| Protein GI | 146309616 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAGC GCAACACGCC GCAACGTCGC CACACCATCC TCGCCCTGCT CGCCGAGCAG
GGTGAAGTGA GCGTGGACGC CCTGGCGCAG CACTTTGCCA CCAGCGAAGT GACCATCCGC
AAGGATCTTG CTGCGCTGGA AAAGAATGGC CTGCTATTGC GTCGCTACGG CGGCGCCGTG
CCGGTGCCGC AGGAGTTGTT CAGTGAGCCG ACGCAGGCTG TCTCCCCGTA CAAGCAGGCA
ATTGCCCGCG CCGGTGTGAC GCGCATCCGC GAGCACGCGC GGATCATCAT CGATAGCGGC
ACCACCACGG CAGCGATGAT CCCACAGCTT GGCTACAAGC CCGGGCTGGT GGTGATGACC
AACTCGCTCA ACGTAGCCAA CGCCCTGCGC GATATCGAGC ACGAGCCGGT GCTGCTGATG
ACCGGTGGCA CCTGGGATCC GCATTCGGAA TCCTTCCAGG GCCAGGTGGC CGAACAGGTG
CTGCGTTCCT ATGACTTCGA TCAGTTGTTC ATCGGCGCTG ATGGCATCGA CCTGGAGCGT
GGTACCACCA CCTTCAACGA GCTGCTCGGC CTGTCGCGAG TCATGGCCGA GGTGGCTCGC
GAAGTCATCG TCATGGTCGA AAGCGACAAG ATCGGCCGGC GTATTCCCAA TCTGGAACTG
CCCTGGGGCA GCGTCCATAC CCTGATTACC GACGAGCGCC TGGATACCCA GGCTGCCGAA
CAGATACGCG CGCGCGGCAT CCAGCTGTTC CTCGCGCCGC TGGAAAACTA A
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| Protein sequence | MSKRNTPQRR HTILALLAEQ GEVSVDALAQ HFATSEVTIR KDLAALEKNG LLLRRYGGAV
PVPQELFSEP TQAVSPYKQA IARAGVTRIR EHARIIIDSG TTTAAMIPQL GYKPGLVVMT
NSLNVANALR DIEHEPVLLM TGGTWDPHSE SFQGQVAEQV LRSYDFDQLF IGADGIDLER
GTTTFNELLG LSRVMAEVAR EVIVMVESDK IGRRIPNLEL PWGSVHTLIT DERLDTQAAE
QIRARGIQLF LAPLEN
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