| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4561 |
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| Symbol | |
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| ID | 5107019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 5002560 |
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| End bp | 5003900 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640505832 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001190040 |
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| Protein GI | 146309575 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCTC AGGTCATAGT GGTCGACGAC GAAGCGGCGA TTCGCGAGGC GGTGCAGCAG
TGGCTGGAGC TGTCCGGTTT TACCGTGCGC ACCTGCGCCA GCGCGGCCGA AGCCCTGGCG
GTGGTGGACC GCGACTTCCC CGGCATCGTC GTCAGCGATG TGCGCATGCC CGGCAGCGAT
GGCCTGCAAC TGCTCGACAA GCTGCTGCAG GTGGACGCCG ACCTGCCGGT GATCCTGGTG
ACCGGCCACG GCGACGTGCC CATGGCGGTG CAGGCGCTGC GCCAGGGCGC CTACGACTTC
ATCGAGAAAC CCTTCACCCC CGAGCGCCTG CTCGACAGCG TGCGCCGTGC GCTGGACAAG
CGCCGCCTGG TCTGCGAGAA CCGCCTGCTG CGTCAGCAGG TGGCGAACAA GGGGCGTATC
GAAAGCCAGC TGATCGGCAT TTCGCGGCCG ATGGAAAGCC TGCGCCGGCA GATCCTCGAG
CTGGCCGGCA CCTCGGTCAA CGTGCTCATT CGCGGCGAGA CCGGCAGCGG CAAGGAGCGC
GTGGCGCGCT GCCTGCACGA CTTCAGCCCG CGCGCCGGCA AGGCCTTCGC CGCGCTCAAC
TGCGCGGCGA TTCCCGAGAC CATCTTCGAG AGCGAGCTGT TCGGTCACGA GAGCGGCGCC
TTCACCGGTG CCCAGGCGCG GCGCATCGGC CGTATCGAGC ATGCCGACGG CGGTACCCTG
TTCCTCGACG AGGTCGAGAG TCTGCCGTTG GCGCAGCAGG TCAAGCTCCT GCGCGTGCTG
CAGGAGAAGA CTCTGGAGCG CCTCGGTTCG AACAAGAGCA TCCAGGTCGA TCTGCGGGTG
ATCAGCGCGG CCAAGCCGGA TCTGCTCGAC GAGGTCAAGG CCGGGCGCTT CCGCGAGGAC
CTGGTGTATC GCCTGAACGT CGCCACCCTG CACATTCCGC CGCTGCGCGA GCGCCGCGAG
GACATTCCGC TGCTGTTCGA GCACTTTGCT CGTGCCGCCG CCGAGCGTCA CGGCCGCGAG
GTGCCACCGC TGGCACCCAG CGAGCTGGCG CGGCTGCTCG GTCATGACTG GCCGGGCAAC
GTACGCGAGC TGATCAATGC CGCCGAGCGC CATGCCCTGG GGCTGTCCAG CCCGCCGCCG
GCCGAGCGCT TCGCCGGTCA GGCACTGGCG CAGCAGATGG AAGCCTTCGA AGCGCAGTGC
CTGCACAACG CCCTGCTGCA ATGCCAGGGC AACATCGCCG CGGTGATGGA GATGCTGCAG
CTGCCGCGCC GCACCCTCAA CGAGAAGATG CAGCGCCACG GTCTGGCGCG CGGTGACTAC
CTGCCCGGCG GCGAGGAGTA G
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| Protein sequence | MSAQVIVVDD EAAIREAVQQ WLELSGFTVR TCASAAEALA VVDRDFPGIV VSDVRMPGSD
GLQLLDKLLQ VDADLPVILV TGHGDVPMAV QALRQGAYDF IEKPFTPERL LDSVRRALDK
RRLVCENRLL RQQVANKGRI ESQLIGISRP MESLRRQILE LAGTSVNVLI RGETGSGKER
VARCLHDFSP RAGKAFAALN CAAIPETIFE SELFGHESGA FTGAQARRIG RIEHADGGTL
FLDEVESLPL AQQVKLLRVL QEKTLERLGS NKSIQVDLRV ISAAKPDLLD EVKAGRFRED
LVYRLNVATL HIPPLRERRE DIPLLFEHFA RAAAERHGRE VPPLAPSELA RLLGHDWPGN
VRELINAAER HALGLSSPPP AERFAGQALA QQMEAFEAQC LHNALLQCQG NIAAVMEMLQ
LPRRTLNEKM QRHGLARGDY LPGGEE
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