| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4547 |
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| Symbol | |
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| ID | 5107005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4983931 |
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| End bp | 4985319 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640505818 |
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| Product | L-serine ammonia-lyase |
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| Protein accession | YP_001190026 |
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| Protein GI | 146309561 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATCA GCGTTTTCGA CCTGTTCAAA GTCGGCATAG GCCCGTCCAG TTCCCACACC
GTCGGCCCGA TGCGCGCGGC CGCCCTGTTC ACCCACGCCC TGGAGAACCA CGGCCATATG
CCGCAGGTGA CCCGTGTCGC CGCCGAGCTG TATGGCTCGC TGGGCGCCAC CGGCAAGGGC
CACGGCAGTG ACAAGGCGGT GCTGCTCGGC CTCAGCGGCC ATGAGCCGGA CACCGTGGAC
GTGGATCAGG TGCCGGCCTA CATCGACACC ATCCGTCGCG ACAAGCGCAT CGTCCTGGCC
GGCAAGCATG CCGTGCGCTT CGACGAGAAG ACCGATCTGA AGATGTTCCG CAAGGCGCTG
CCGCTGCACG CCAACGGCCT GCGTTTCGCC GCCTTCGACG CCGCCGGGAT TCAGGTACAC
GAAGCCACCT ACTACTCGGT GGGCGGCGGC TTCGTGGTCA GCGAGGCGAT TCTCGCCGAC
GGCTCCAAGC ACAAGGTCAT CGCCCCGGAC GCCACGGCCC TGCCGCTGCC GTTTCGCAGC
GGTGCCGACC TGCTGCGCCT GAGCCGCGAA CACGGTATCG GCATCGCCGA AATCATGCGC
CGCAACGAGC GTCACTGGCG CAGCGACGAA GAGACCGACG CCGGCCTGCT GGAAATCTGG
AAGGTGATGC AGGCCTGCGT CGAGCGTGGC TGCCGCACCG AGGGCATCCT CCCGGGCGGT
TTCAAGGTGC GTCGCCGCGC CGCGATCCTG GCGCGCAAGC TGGGCGGCTT CCAGCGCAGC
TACCTGGAAG ATCCGCTGCG CATGCTCGAC TGGGTCAACC TCTGGGCCCT GGCGGTGAAC
GAGGAGAATG CCGCCGGTGG CCGCGTGGTC ACCGCCCCGA CCAACGGCGC CGCCGGCATC
ATCCCGGCCG TGCTGCACTA CTACGCCAAC GCCATTTCCG GCGCCAGCGA GCGCGGCATC
ATCGACTTCC TGCTCACCGC CGGTGCCATC GGCATCCTGT ACAAGGAAAA CGCCTCGATC
AGCGGCGCCG AAGTGGGCTG CCAGGGCGAG GTCGGCGTGG CCTGTTCGAT GGCCGCCGGC
GCGCTGTGCG CGGTACTCGG CGGCACCCCG GAGCAGGTCG AGAACGCCGC CGAGATCGGC
ATGGAGCACC ACCTGGGCCT GACCTGCGAC CCGGTCGGCG GTCTGGTGCA GATCCCCTGC
ATCGAACGCA ACGCCATCGC CTCGGTGAAG GCCATCAACG CCGCGCGCAT GGCGCTGTAC
GGCGACGGCG CGCACTACGT GAGCCTGGAC AAGGTGATCA AGACCATGCG CGAGACCGGT
GCCGACATGC TGACCAAGTA CAAGGAAACC GCTCGCGGCG GCCTGGCGGT GAATATCATC
GAGTGCTGA
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| Protein sequence | MAISVFDLFK VGIGPSSSHT VGPMRAAALF THALENHGHM PQVTRVAAEL YGSLGATGKG
HGSDKAVLLG LSGHEPDTVD VDQVPAYIDT IRRDKRIVLA GKHAVRFDEK TDLKMFRKAL
PLHANGLRFA AFDAAGIQVH EATYYSVGGG FVVSEAILAD GSKHKVIAPD ATALPLPFRS
GADLLRLSRE HGIGIAEIMR RNERHWRSDE ETDAGLLEIW KVMQACVERG CRTEGILPGG
FKVRRRAAIL ARKLGGFQRS YLEDPLRMLD WVNLWALAVN EENAAGGRVV TAPTNGAAGI
IPAVLHYYAN AISGASERGI IDFLLTAGAI GILYKENASI SGAEVGCQGE VGVACSMAAG
ALCAVLGGTP EQVENAAEIG MEHHLGLTCD PVGGLVQIPC IERNAIASVK AINAARMALY
GDGAHYVSLD KVIKTMRETG ADMLTKYKET ARGGLAVNII EC
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