Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4546 |
Symbol | |
ID | 5107004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4982884 |
End bp | 4983786 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640505817 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001190025 |
Protein GI | 146309560 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATCA CCCGCCTGCG CACCCTGCGC GAACTGGCTC GCTGCCGCAC CATGGCGGCG GCCGCCGAGT CGTTGCACCT GACGCCCTCG GCCGTCTCGC AGCAGGTCGC CCAGCTCGAG CGCGAGGTCG ACATGGCGCT GATCGAACGG CGTGGTCGCG GTGTGGTACT GACGCCGGCC GGTGAGCGGC TGGTGGCGCA TGCCGAGCGC ATCCTCATGG TGCTCGACGA GGCGCGCTCC GAGCTGGCGC AGTTGCGCGG GGAAATCGCC GGTGAACTGC GTGTGGCGGC CTTTCCGTCG ATTGCCGTGG CGGTGATCGC GGAAACCGTG CGCGCACTGC GCAGCGCCTA CCCGCGGCTG AATGTGGTGG TGCTGGACCT TGAGCCGCAG GAAAGCCTCA GCGCCCTGGG CTCCTGGCAG ATCGACGTGG CGGTGATCGA CGACCTGGCC GTGACCCCGG ACGAGAACCG CGAGCACTAC GCGCTGATTC CCCTGACCCA GGACCTGCTA CATGTGCTGC TGCCCATCGA CCATGCCCTG GCCCGGCGCG ACAGCCTGAC CATCGGCGAC CTGCGCGACG AAGCCTGGGC GCTGGATTCC ACCGGCAGCT CGTTTGGCGA ATTCATCACC AACCTGTGCC GCCGCTCGGG CTTTGCGCCG CGCATCAACG CCCACTGCGC GGGCTTTGAG ATGGTCGCGG CCATGGTCGC CTCGGGCAAT TCCATCTCCA TCGTCTCCGG CCTGCGCCTG GTGCGCCCGC TGCCTGGCGT CACCGCCGTG CCGCTGCTAC CCGATATCCA GCGCGGCGTG TTCCTCGCCT ACCGCAAGGG CGAGCGCGAT CACCCGGCGG TGAACGTGTT TCTCGACGAG GCGGTGTATA CGGCTGACAG GGTGCTGGGT TAG
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Protein sequence | MDITRLRTLR ELARCRTMAA AAESLHLTPS AVSQQVAQLE REVDMALIER RGRGVVLTPA GERLVAHAER ILMVLDEARS ELAQLRGEIA GELRVAAFPS IAVAVIAETV RALRSAYPRL NVVVLDLEPQ ESLSALGSWQ IDVAVIDDLA VTPDENREHY ALIPLTQDLL HVLLPIDHAL ARRDSLTIGD LRDEAWALDS TGSSFGEFIT NLCRRSGFAP RINAHCAGFE MVAAMVASGN SISIVSGLRL VRPLPGVTAV PLLPDIQRGV FLAYRKGERD HPAVNVFLDE AVYTADRVLG
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