| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4508 |
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| Symbol | |
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| ID | 5106966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4941261 |
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| End bp | 4941782 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640505779 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001189987 |
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| Protein GI | 146309522 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCTCT CCCATCTAGA CAGCGTGTTC ATCAGCCAGC GCACCCCGCT GCTGCGCACG
CTGGTGAAAA TCGTGAAGAA CGCCAGCATC GCCGAGGAGC TGGTGCAGGA GACCTACCTG
CGGGTCGCCC GCAGCCTGCG GGAAAAGCCC GTCGACCATC TCGAACCCTT TCTCTTCCAG
ACCGGCCGCA ATCTCGCGCT CGACCACCTG CGCCGCGAGC GCATGCAGTC GCGCACCATG
CTCGACGACG TGCCGGACGA AGTCATGCAG GCGGTCCCTG CGCCCGGCTC CTCCAGCGAG
GACAGCCTGC ACGCCGAGCG TCTGCTGCAG CGCCTGGGCA GTGCCCTGCA ACAGCTGAGC
GAGCGCCAGC AGCGCATCTT CATTCTCAGC CGTCTGCATG GTCAGGGTTA TGCACAGATC
GCCGCGGAAC TGGGCGTGTC GCCCAGCACG GTGCAGAAGG AACTCAAGCT GATCATGGCC
TTGTGCATGA CCCTGCTCGA CCGCCTCACC CCGCCGACAT GA
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| Protein sequence | MTLSHLDSVF ISQRTPLLRT LVKIVKNASI AEELVQETYL RVARSLREKP VDHLEPFLFQ
TGRNLALDHL RRERMQSRTM LDDVPDEVMQ AVPAPGSSSE DSLHAERLLQ RLGSALQQLS
ERQQRIFILS RLHGQGYAQI AAELGVSPST VQKELKLIMA LCMTLLDRLT PPT
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