Gene Pmen_4497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4497 
Symbol 
ID5106955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4931692 
End bp4932480 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content69% 
IMG OID640505768 
ProductABC transporter related 
Protein accessionYP_001189976 
Protein GI146309511 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG CCCTGATCCG TCTCGACGGG GTCGCGGTCA GCTTCAACGG CCAGGCCGTG 
CTGGACGACG TGCAGCTCAG CGTGCGGCCC GGCGAGATCG TCACCCTGAT CGGCCCCAAT
GGCGCCGGCA AGACCACCCT GGTGCGCGTG GTACTCGGCC TGCTCCAGCC CGAGCGTGGC
AACGTGCGCC GCGCGCCGCG CCTGCGCATC GGCTACATGC CGCAGAAACT GCATGTCGAC
GCCACCCTGC CGCTGTCGGT GCTGCGCTTT CTGCGCCTGG TACCGGGGGT GGATCGCAAC
CGCGCGCTGG CGGCGCTGGC CGAAGTGGGT GCCGAGCAGG TGATCGACAG TCCGCTGCAG
AGCATTTCCG GCGGCGAGAT GCAGCGTGTG CTGCTGGCCC GCGCCCTGCT GCGCGAGCCG
CAGCTGCTGG TGCTCGACGA ACCGGTGCAG GGCGTCGACG TCGCCGGCCA AGCCGAGCTG
TACCGGCTCA TCTCGCGCCT GCGCGAGCGT CACGGCTGCG GCGTGCTGAT GGTGTCGCAC
GACCTGCACC TGGTGATGAG CGCCACCGAT CAGGTGGTCT GCCTGAATCG CCACGTGTGC
TGCTCCGGGC ATCCGGAACA GGTCAGCGGC GATCCGGCCT TCATCGAGCT GTTCGGCCAG
GACGCCAAGA GCCTGGCCAT CTATCACCAC CATCATGACC ACGCTCACGA CCTGCATGGC
GGCGTGGTCA AGGCCGGCCT GACCATCCAC GGCCCTGCCC ACGTTCACGG ACCCGGTTGC
AAGCACTGA
 
Protein sequence
MNDALIRLDG VAVSFNGQAV LDDVQLSVRP GEIVTLIGPN GAGKTTLVRV VLGLLQPERG 
NVRRAPRLRI GYMPQKLHVD ATLPLSVLRF LRLVPGVDRN RALAALAEVG AEQVIDSPLQ
SISGGEMQRV LLARALLREP QLLVLDEPVQ GVDVAGQAEL YRLISRLRER HGCGVLMVSH
DLHLVMSATD QVVCLNRHVC CSGHPEQVSG DPAFIELFGQ DAKSLAIYHH HHDHAHDLHG
GVVKAGLTIH GPAHVHGPGC KH