Gene Pmen_4448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4448 
Symbol 
ID5107143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4877825 
End bp4878145 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content69% 
IMG OID640505719 
Productantibiotic biosynthesis monooxygenase 
Protein accessionYP_001189927 
Protein GI146309462 
COG category[R] General function prediction only 
COG ID[COG2329] Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCTT TCGCCGATAC ACCCGAGCCG CCCTACTACG CGGTGATCTT CACCTCGACC 
CTCGGCGATG ACAGCGAAGG CTACGCCGCC ATGGCCAGCC GCATGGTCGA ACTGGCGGCC
GAGCAGCCGG GCTTTCTCGG CGCCGAATCG GCGCGCGAGG GGCTGGGTAT CACGGTCTCC
TACTGGCGCG ATCTGGACGC CATCGCCGCC TGGAAGGCCA ACGCCGAGCA CCGCGAGGCC
CAACGTCTGG GCCGGGCGCG CTGGTACAGC GGGTTTCGCC TGCGCATCGC GCGGGTCGAA
CGCGACTACG GTCTGGACTG A
 
Protein sequence
MTPFADTPEP PYYAVIFTST LGDDSEGYAA MASRMVELAA EQPGFLGAES AREGLGITVS 
YWRDLDAIAA WKANAEHREA QRLGRARWYS GFRLRIARVE RDYGLD