| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4424 |
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| Symbol | |
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| ID | 5107119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4844477 |
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| End bp | 4845271 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640505690 |
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| Product | flagellar biosynthetic protein FliR |
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| Protein accession | YP_001189903 |
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| Protein GI | 146309438 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.926319 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAC CCGTGCTGCA TGCCAGCCAG TATCTGACCA GCCTGCAGGC TTACTGGTGG
CCGTTCTGCC GCATCCTGGC GCTGCTCAGC ATGGCCCCCT TGTTCAACCA CAAGGCGGTA
TCGGTGCGTG TGCGCATCCT GCTCGCCCTG GCGCTGACGG TGGCATTGGG CGCGGCATTG
CCGGACATGC CGCCGATCGA CCCGCTGTCG CTGCAAGGCC TGATGACCGC ACTGGAACAG
ATCGCCTTCG GCGTGCTGCT GGGCCTGACC CTGCAACTGG TGTTCACCAT CTTCATGCTG
GTCGGCGAGG TGGTATCGAC GCAGATGGGC ATGAGCATGG CGCGCTACAA CGATCCGGTG
AACGGCGTGT CGTCGTCATC GATCGTCTAT CAGCTGTACT TCATCCTGCT GGTACTGCTG
TTCTTCGCCA TCGACGGCCA TCTGGTCACC GTCAGCGTGC TGTACCAGAG CTTCCTGTTC
TGGCCGGTGG GCAGCGGTCT GCATTACCTG GGCGCGCAGA GCTTCGTTCA GGCCTTCGCC
TGGGTATTGG CCGCCGCCGT GCTGGTGACC CTGCCGATCG TGTTCTGCCT GACCCTGGTG
CAGTTCTGCT TCGGTCTGCT CAACCGCATT TCACCGGCGA TGAACCTGTT CTCCCTGGGC
TTTCCCATCA GCATTCTGAT GGGCCTGCTG TGCATCTACC TGACCCTGCC CAACCTGCCG
GACAGCTACC TGCACCTGAC CCGCGAACTG CTCAACGGCA TCGGCGTGAT CCTGCACGAG
GGCGGCGATG TCTGA
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| Protein sequence | MSEPVLHASQ YLTSLQAYWW PFCRILALLS MAPLFNHKAV SVRVRILLAL ALTVALGAAL
PDMPPIDPLS LQGLMTALEQ IAFGVLLGLT LQLVFTIFML VGEVVSTQMG MSMARYNDPV
NGVSSSSIVY QLYFILLVLL FFAIDGHLVT VSVLYQSFLF WPVGSGLHYL GAQSFVQAFA
WVLAAAVLVT LPIVFCLTLV QFCFGLLNRI SPAMNLFSLG FPISILMGLL CIYLTLPNLP
DSYLHLTREL LNGIGVILHE GGDV
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