Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4415 |
Symbol | fliH |
ID | 5107110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4836564 |
End bp | 4837256 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640505681 |
Product | flagellar assembly protein H |
Protein accession | YP_001189894 |
Protein GI | 146309429 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.127482 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGTCA AGGTGATCAA GGGCGATACC CGCCAGTGGC GCGCCTACCG CTTTCCGCCA CGCAGCAGCC AGCCGGCAGT GGACTGGAGC GGCGATGCCG CCGGCCTGCA GCGGGTCATG GCCGACGGCT TTCAGCAGGG CATCGAGAAG GGCTACCAGG ACGGTCTGCA GCAGGGCGAG GAAGCCGGAC GCCAGGCCGG CTTCGAGCAG GGTCGGGCCG AGGGCCTGCG CCTGGGCCGT GAGGACGGCC GCAATGAAGG ACGGCGCGAA TTCGAGCTGG CCGCGCAGCC ACTGGAGCGG ATCAGCCAAA CGCTCGAGCA GTACCTTGGC GAGCTGGAGC ACAAGCGTCG TCAGGAGCTG CTGGAACTGG TGAAGAAGGT GTCGCAGCAG GTCATCCGCT GCGAACTCAC GCTGCATCCG ACCCAGTTGC TGGCACTGGT GGAGGAAGCC CTGAGCAGCA TGCCGGGCGA GCCCGAAGAC GTGCAGGTGC TGCTCAGCCC CGAGGAATAC GCGCGGATCA AGGCGCTGGC GCCGGAGCGC GCGGCCGGCT GGAAGCTGGT GGCCGACGAG CGCCTGGCCT TGGGCGAGTG CCGCGTGATC ACGCCGCAGG CCGAGGCCGA CGTGGGCTGC CAGCAGCGCC TGGATGCCTG CATCGACACC CTGGCCGAAC ACCTGCATCT GACCGAGGCC TGA
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Protein sequence | MTVKVIKGDT RQWRAYRFPP RSSQPAVDWS GDAAGLQRVM ADGFQQGIEK GYQDGLQQGE EAGRQAGFEQ GRAEGLRLGR EDGRNEGRRE FELAAQPLER ISQTLEQYLG ELEHKRRQEL LELVKKVSQQ VIRCELTLHP TQLLALVEEA LSSMPGEPED VQVLLSPEEY ARIKALAPER AAGWKLVADE RLALGECRVI TPQAEADVGC QQRLDACIDT LAEHLHLTEA
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