| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4409 |
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| Symbol | ubiA |
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| ID | 5107262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4832390 |
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| End bp | 4833280 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640505675 |
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| Product | 4-hydroxybenzoate octaprenyltransferase |
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| Protein accession | YP_001189888 |
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| Protein GI | 146309423 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
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| TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0458215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACACCC GCCTGCTGCA ATCGACCACC CGCCTGCACC CGCGCGCCTG GGACTTCATT
CAGCTGATGC GCCTGGACAA ACCCATCGGC ATCTACCTGC TGCTGTGGCC GACCCTGTGG
GCGCTGTGGG TGGCGGCCGA AGGCGTGCCG AGTGCGAAGA ATCTGTTCAT TTTCGTGTTC
GGCGTAATCC TGATGCGTGC CGCCGGTTGC GTGATCAACG ACTATGCCGA CCGCAATTTC
GACGGTCACG TCAGCCGTAC CCGGGCGCGC CCGCTGGCCA GCGGCAAGAT CCAGCCGCGC
GAGGCACTGG TGCTGTTCGC CGTGCTGGTG ACGGCCAGCT TCGTGCTGGT GCTGTTCACC
AACGCCACCA CCATCTGGCT GTCGTTCGGC GGCCTGGCCC TGGCCGCCTG CTACCCCTTC
ATGAAGCGCT ACACCTTTTA CCCGCAGGTG GTGCTCGGCG CGGCCTTCTC CTGGGGCATG
CCCATGGCCT TTACCGCCGA GACCGGCAGC CTGCCGCCGG AAGCCTGGCT GCTGTACATC
GCCAACCTGC TGTGGACCGT GGCCTACGAC ACCTACTACG CCATGGCCGA CCGCGAGGAC
GACCTGAAGA TCGGGGTTAA ATCCACCGCC ATCCTGTTCG GCGACGCCGA CCGCCTGATC
ATCGCCAGCC TGCAGGGCCT GGCGCTGCTC TGTCTGCTGC TGGCCGGCGC GCGCTTCGAG
CTGGGCGTCT GGTTCCACGC CGGGCTGCTG GTGGCCGCCG CCTGCTTCGT CTGGGAATAC
CACAAGACCC GCAACCGCAA GCCGATGGCC TGCTTCAACG CCTTCCTGCA CAACCACTGG
GCGGGGCTGG CGATCTTCGT CGGCATCGTG CTGGACTACG CATTGCGCTA A
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| Protein sequence | MYTRLLQSTT RLHPRAWDFI QLMRLDKPIG IYLLLWPTLW ALWVAAEGVP SAKNLFIFVF
GVILMRAAGC VINDYADRNF DGHVSRTRAR PLASGKIQPR EALVLFAVLV TASFVLVLFT
NATTIWLSFG GLALAACYPF MKRYTFYPQV VLGAAFSWGM PMAFTAETGS LPPEAWLLYI
ANLLWTVAYD TYYAMADRED DLKIGVKSTA ILFGDADRLI IASLQGLALL CLLLAGARFE
LGVWFHAGLL VAAACFVWEY HKTRNRKPMA CFNAFLHNHW AGLAIFVGIV LDYALR
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