Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4407 |
Symbol | |
ID | 5107260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4830261 |
End bp | 4831580 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640505673 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_001189886 |
Protein GI | 146309421 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR02966] phosphate regulon sensor kinase PhoR |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.146321 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTCCA TCGTGAATCA AGACTGGCGT GGCGCCGTGG TGCGCCGCCT GTTGCTGCTG GTTGGCGCCT GCCTGCTGCT CGGCTTCATC ACCGGCGAAT ACGCCTGGGC GCTGGCCGTG GGCCTGGCGA TTCATCTGGG CTGGACCCTC AGCCAGCTGC TGCGCCTGCA CAAGTGGCTG CGCGAGCACA AACCCGACGA GCCGCCGCCG GACGGTTACG GCCTGTGGGG CGAGGTGTTC GACAGCATCT ACCACCTGCA GCGCCGCAAT CAGAAGGCGC GCGGCCGCCT GCAGGCGGTG ATTGATCGCG TGCAGGAGTC CACCGCGGCG CTCAAGGATG CGGTGGTGAT GCTCGACAGC CAGGGCAATC TGGAGTGGTG GAACCGCGCG GCCGAGACTC TGCTGGGGTT GAAGACGCCC CAGGACAGCG GTCAGCCCAT GGCCAACCTG GTGCGTGATC CGCGTTTCAA GGAGTACTTC GAGCGCGGCA ACTATGCCGA TGCGCTGGAG ATTCCCTCGC CGATCAACGA CCGCCGCCGC CTGCAGTTCC ATATCACCCG CTACGGCAAC CGCGAGCACC TGCTGCTGGT GCGCGACGTC ACCCGCCTGT ATCAGCTCGA GCAGATGCGC AAGGACTTCG TCGCCAACGT GTCCCATGAG CTGCGCACGC CGCTGACGGT GATCGCCGGC TACCTGGAGA CCCTGCTGGA CAACGTCGAG GCGGTCAATC CGCGCTGGCT GCGCGCGCTG CAGCAGATGC AGCAGCAGGG CGCGCGCATG CAGACCCTGC TCAACGATCT GCTGCTGCTG GCCAAGCTGG AGGCCACCGA CTACCCCTCG GACAACCAGC CGGTGGCGGT TGACCTGATG CTGCTGTCGA TCAAGAACGA CGCCCAGGCG CTGTCCGGCG AACAGAACCA CCGCATCAGC CTGGAGGCCG ATCCGCACCT CAAGCTCAAG GGCAGCGAGA CCGAGTTGCG CAGCGCCTTC TCCAACCTGG TGTTCAACGC GGTGAAGTAC ACCCCGGCCG GCGGCGAGAT TCGCATTCGC TGGTTCGGTG ACGAGCAGGG CGCGCACCTG GCGGTCAGCG ACACCGGCAT GGGCATCGAA GCCAAGCACC TGCCGCGCCT GACCGAGCGC TTCTACCGGG TCGACTCCAG CCGCGCCAGC AACACCGGCG GCACCGGCCT GGGCCTGGCC ATCGTCAAGC ATGTGCTGCT GCGCCACCGC GGCAATCTGG AGATCAGCAG CGTGCCGGGC AAGGGCAGCA CCTTCACCTG CCATTTCGTA CCTGCGCAGG TCGTCCAGCG CGGGCGCTGA
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Protein sequence | MRSIVNQDWR GAVVRRLLLL VGACLLLGFI TGEYAWALAV GLAIHLGWTL SQLLRLHKWL REHKPDEPPP DGYGLWGEVF DSIYHLQRRN QKARGRLQAV IDRVQESTAA LKDAVVMLDS QGNLEWWNRA AETLLGLKTP QDSGQPMANL VRDPRFKEYF ERGNYADALE IPSPINDRRR LQFHITRYGN REHLLLVRDV TRLYQLEQMR KDFVANVSHE LRTPLTVIAG YLETLLDNVE AVNPRWLRAL QQMQQQGARM QTLLNDLLLL AKLEATDYPS DNQPVAVDLM LLSIKNDAQA LSGEQNHRIS LEADPHLKLK GSETELRSAF SNLVFNAVKY TPAGGEIRIR WFGDEQGAHL AVSDTGMGIE AKHLPRLTER FYRVDSSRAS NTGGTGLGLA IVKHVLLRHR GNLEISSVPG KGSTFTCHFV PAQVVQRGR
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